Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.29
RTL9Q8NET4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC29.39■■■□□ 2.29
RTL9Q8NET4 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.29
RTL9Q8NET4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
RTL9Q8NET4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RTL9Q8NET4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RTL9Q8NET4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
RTL9Q8NET4 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RTL9Q8NET4 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
RTL9Q8NET4 KRT16P3-201ENST00000439127 1283 ntBASIC29.38■■■□□ 2.29
RTL9Q8NET4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.38■■■□□ 2.29
RTL9Q8NET4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC29.38■■■□□ 2.29
RTL9Q8NET4 FOXO3B-201ENST00000395675 1928 ntBASIC29.38■■■□□ 2.29
RTL9Q8NET4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
RTL9Q8NET4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
RTL9Q8NET4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC29.37■■■□□ 2.29
RTL9Q8NET4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RTL9Q8NET4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC29.36■■■□□ 2.29
RTL9Q8NET4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
RTL9Q8NET4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC29.36■■■□□ 2.29
RTL9Q8NET4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC29.36■■■□□ 2.29
RTL9Q8NET4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
RTL9Q8NET4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RTL9Q8NET4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC29.35■■■□□ 2.29
RTL9Q8NET4 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RTL9Q8NET4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
RTL9Q8NET4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.34■■■□□ 2.29
RTL9Q8NET4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.34■■■□□ 2.29
RTL9Q8NET4 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC29.34■■■□□ 2.29
RTL9Q8NET4 MIR935-201ENST00000401179 91 ntBASIC29.34■■■□□ 2.29
RTL9Q8NET4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC29.34■■■□□ 2.29
RTL9Q8NET4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
RTL9Q8NET4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
RTL9Q8NET4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC29.33■■■□□ 2.29
RTL9Q8NET4 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
RTL9Q8NET4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC29.32■■■□□ 2.28
RTL9Q8NET4 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.32■■■□□ 2.28
RTL9Q8NET4 ERN1-208ENST00000606895 2068 ntBASIC29.32■■■□□ 2.28
RTL9Q8NET4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC29.32■■■□□ 2.28
RTL9Q8NET4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTL9Q8NET4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
RTL9Q8NET4 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC29.31■■■□□ 2.28
RTL9Q8NET4 AC010501.1-201ENST00000606270 1962 ntBASIC29.31■■■□□ 2.28
RTL9Q8NET4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.31■■■□□ 2.28
RTL9Q8NET4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTL9Q8NET4 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
RTL9Q8NET4 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
RTL9Q8NET4 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.3■■■□□ 2.28
RTL9Q8NET4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC29.3■■■□□ 2.28
RTL9Q8NET4 AF131216.4-201ENST00000638924 1588 ntBASIC29.3■■■□□ 2.28
RTL9Q8NET4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.29■■■□□ 2.28
RTL9Q8NET4 TSPY9P-201ENST00000440215 945 ntBASIC29.29■■■□□ 2.28
RTL9Q8NET4 TSPY11P-201ENST00000442607 1045 ntBASIC29.29■■■□□ 2.28
RTL9Q8NET4 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
RTL9Q8NET4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
RTL9Q8NET4 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.29■■■□□ 2.28
RTL9Q8NET4 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
RTL9Q8NET4 AC097639.1-201ENST00000565519 1891 ntBASIC29.28■■■□□ 2.28
RTL9Q8NET4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
RTL9Q8NET4 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RTL9Q8NET4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.27■■■□□ 2.28
RTL9Q8NET4 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RTL9Q8NET4 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.27■■■□□ 2.28
RTL9Q8NET4 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RTL9Q8NET4 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
RTL9Q8NET4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC29.27■■■□□ 2.28
RTL9Q8NET4 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RTL9Q8NET4 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
RTL9Q8NET4 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC29.27■■■□□ 2.28
RTL9Q8NET4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC29.27■■■□□ 2.28
RTL9Q8NET4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC29.26■■■□□ 2.28
RTL9Q8NET4 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC29.26■■■□□ 2.28
RTL9Q8NET4 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
RTL9Q8NET4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC29.26■■■□□ 2.27
RTL9Q8NET4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC29.26■■■□□ 2.27
RTL9Q8NET4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC29.25■■■□□ 2.27
RTL9Q8NET4 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
RTL9Q8NET4 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
RTL9Q8NET4 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC29.25■■■□□ 2.27
RTL9Q8NET4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC29.25■■■□□ 2.27
RTL9Q8NET4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.25■■■□□ 2.27
RTL9Q8NET4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RTL9Q8NET4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
RTL9Q8NET4 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RTL9Q8NET4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
RTL9Q8NET4 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 MIR638-201ENST00000385237 100 ntBASIC29.24■■■□□ 2.27
RTL9Q8NET4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC29.24■■■□□ 2.27
RTL9Q8NET4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
RTL9Q8NET4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC29.23■■■□□ 2.27
RTL9Q8NET4 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC29.23■■■□□ 2.27
RTL9Q8NET4 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC29.22■■■□□ 2.27
RTL9Q8NET4 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
RTL9Q8NET4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC29.22■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms