Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 AL356740.2-201ENST00000601559 647 ntBASIC27.13■■□□□ 1.93
SHCBP1Q8NEM2 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SHCBP1Q8NEM2 AF131216.4-201ENST00000638924 1588 ntBASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
SHCBP1Q8NEM2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
SHCBP1Q8NEM2 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 RALB-208ENST00000631312 311 ntTSL 5 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC27.08■■□□□ 1.93
SHCBP1Q8NEM2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHCBP1Q8NEM2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHCBP1Q8NEM2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
SHCBP1Q8NEM2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
SHCBP1Q8NEM2 FOXO3B-201ENST00000395675 1928 ntBASIC27.07■■□□□ 1.92
SHCBP1Q8NEM2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC27.06■■□□□ 1.92
SHCBP1Q8NEM2 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHCBP1Q8NEM2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
SHCBP1Q8NEM2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
SHCBP1Q8NEM2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC27.06■■□□□ 1.92
SHCBP1Q8NEM2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
SHCBP1Q8NEM2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC27.04■■□□□ 1.92
SHCBP1Q8NEM2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC27.04■■□□□ 1.92
SHCBP1Q8NEM2 MIR4466-201ENST00000606121 54 ntBASIC27.04■■□□□ 1.92
SHCBP1Q8NEM2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SHCBP1Q8NEM2 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
SHCBP1Q8NEM2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
SHCBP1Q8NEM2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC27.03■■□□□ 1.92
SHCBP1Q8NEM2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC27.03■■□□□ 1.92
SHCBP1Q8NEM2 AL512631.2-201ENST00000604634 923 ntBASIC27.03■■□□□ 1.92
SHCBP1Q8NEM2 AC110285.6-201ENST00000617652 491 ntBASIC27.03■■□□□ 1.92
SHCBP1Q8NEM2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SHCBP1Q8NEM2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC27.02■■□□□ 1.92
SHCBP1Q8NEM2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
SHCBP1Q8NEM2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
SHCBP1Q8NEM2 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC27.02■■□□□ 1.92
SHCBP1Q8NEM2 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SHCBP1Q8NEM2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
SHCBP1Q8NEM2 CD72-202ENST00000378430 585 ntTSL 3 BASIC27.01■■□□□ 1.91
SHCBP1Q8NEM2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC27.01■■□□□ 1.91
SHCBP1Q8NEM2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 AK3-203ENST00000447596 705 ntTSL 2 BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27■■□□□ 1.91
SHCBP1Q8NEM2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SHCBP1Q8NEM2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
SHCBP1Q8NEM2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.98■■□□□ 1.91
SHCBP1Q8NEM2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.97■■□□□ 1.91
SHCBP1Q8NEM2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC26.97■■□□□ 1.91
SHCBP1Q8NEM2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC26.97■■□□□ 1.91
SHCBP1Q8NEM2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.97■■□□□ 1.91
SHCBP1Q8NEM2 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHCBP1Q8NEM2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms