Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SMRP1Q8NCR6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 ABCB10P1-201ENST00000614297 2181 ntBASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SMRP1Q8NCR6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMRP1Q8NCR6 EDA-201ENST00000338901 1233 ntBASIC24.8■■□□□ 1.56
SMRP1Q8NCR6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.8■■□□□ 1.56
SMRP1Q8NCR6 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SMRP1Q8NCR6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMRP1Q8NCR6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SMRP1Q8NCR6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SMRP1Q8NCR6 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
SMRP1Q8NCR6 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SMRP1Q8NCR6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
SMRP1Q8NCR6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SMRP1Q8NCR6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SMRP1Q8NCR6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SMRP1Q8NCR6 LINC01003-201ENST00000564834 1764 ntBASIC24.78■■□□□ 1.56
SMRP1Q8NCR6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
SMRP1Q8NCR6 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SMRP1Q8NCR6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 AL355001.2-201ENST00000620617 1191 ntBASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
SMRP1Q8NCR6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC24.76■■□□□ 1.55
SMRP1Q8NCR6 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMRP1Q8NCR6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMRP1Q8NCR6 DRD5P2-201ENST00000421395 2012 ntBASIC24.76■■□□□ 1.55
SMRP1Q8NCR6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SMRP1Q8NCR6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMRP1Q8NCR6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC24.75■■□□□ 1.55
SMRP1Q8NCR6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
SMRP1Q8NCR6 MIR6722-201ENST00000617286 78 ntBASIC24.75■■□□□ 1.55
SMRP1Q8NCR6 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SMRP1Q8NCR6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SMRP1Q8NCR6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SMRP1Q8NCR6 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC24.74■■□□□ 1.55
SMRP1Q8NCR6 AC024257.2-201ENST00000549699 147 ntBASIC24.74■■□□□ 1.55
SMRP1Q8NCR6 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.74■■□□□ 1.55
SMRP1Q8NCR6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SMRP1Q8NCR6 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 AC105265.2-201ENST00000467189 838 ntBASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 SNX5-217ENST00000606557 1087 ntBASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.73■■□□□ 1.55
SMRP1Q8NCR6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SMRP1Q8NCR6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
SMRP1Q8NCR6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SMRP1Q8NCR6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 SRD5A1P1-201ENST00000442297 786 ntBASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC24.71■■□□□ 1.55
SMRP1Q8NCR6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
SMRP1Q8NCR6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SMRP1Q8NCR6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.69■■□□□ 1.54
SMRP1Q8NCR6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC24.69■■□□□ 1.54
SMRP1Q8NCR6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SMRP1Q8NCR6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.69■■□□□ 1.54
SMRP1Q8NCR6 AL136967.2-201ENST00000623968 743 ntBASIC24.69■■□□□ 1.54
SMRP1Q8NCR6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
SMRP1Q8NCR6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.68■■□□□ 1.54
SMRP1Q8NCR6 MIR6821-201ENST00000617625 74 ntBASIC24.68■■□□□ 1.54
SMRP1Q8NCR6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.68■■□□□ 1.54
SMRP1Q8NCR6 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC24.67■■□□□ 1.54
SMRP1Q8NCR6 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
SMRP1Q8NCR6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMRP1Q8NCR6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC24.67■■□□□ 1.54
SMRP1Q8NCR6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SMRP1Q8NCR6 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms