Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD1Q8N668 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD1Q8N668 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
COMMD1Q8N668 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
COMMD1Q8N668 AC010501.1-201ENST00000606270 1962 ntBASIC19.37■□□□□ 0.69
COMMD1Q8N668 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD1Q8N668 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD1Q8N668 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD1Q8N668 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD1Q8N668 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.37■□□□□ 0.69
COMMD1Q8N668 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD1Q8N668 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
COMMD1Q8N668 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD1Q8N668 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD1Q8N668 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD1Q8N668 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COMMD1Q8N668 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
COMMD1Q8N668 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD1Q8N668 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.36■□□□□ 0.69
COMMD1Q8N668 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD1Q8N668 NTF6A-201ENST00000591175 560 ntBASIC19.36■□□□□ 0.69
COMMD1Q8N668 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
COMMD1Q8N668 AC097639.1-201ENST00000565519 1891 ntBASIC19.36■□□□□ 0.69
COMMD1Q8N668 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD1Q8N668 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
COMMD1Q8N668 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.36■□□□□ 0.69
COMMD1Q8N668 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD1Q8N668 SMPD5-203ENST00000639008 1464 ntBASIC19.35■□□□□ 0.69
COMMD1Q8N668 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD1Q8N668 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD1Q8N668 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
COMMD1Q8N668 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC19.35■□□□□ 0.69
COMMD1Q8N668 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.34■□□□□ 0.69
COMMD1Q8N668 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD1Q8N668 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.34■□□□□ 0.69
COMMD1Q8N668 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
COMMD1Q8N668 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
COMMD1Q8N668 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.33■□□□□ 0.69
COMMD1Q8N668 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.33■□□□□ 0.69
COMMD1Q8N668 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD1Q8N668 AC007029.1-201ENST00000604183 313 ntBASIC19.33■□□□□ 0.68
COMMD1Q8N668 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD1Q8N668 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD1Q8N668 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
COMMD1Q8N668 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD1Q8N668 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD1Q8N668 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.32■□□□□ 0.68
COMMD1Q8N668 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.32■□□□□ 0.68
COMMD1Q8N668 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD1Q8N668 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.32■□□□□ 0.68
COMMD1Q8N668 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.32■□□□□ 0.68
COMMD1Q8N668 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.32■□□□□ 0.68
COMMD1Q8N668 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD1Q8N668 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD1Q8N668 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.32■□□□□ 0.68
COMMD1Q8N668 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD1Q8N668 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
COMMD1Q8N668 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.31■□□□□ 0.68
COMMD1Q8N668 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD1Q8N668 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COMMD1Q8N668 AC025884.2-201ENST00000553429 711 ntBASIC19.31■□□□□ 0.68
COMMD1Q8N668 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD1Q8N668 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COMMD1Q8N668 DUSP8P5-201ENST00000422884 1815 ntBASIC19.3■□□□□ 0.68
COMMD1Q8N668 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD1Q8N668 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD1Q8N668 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.3■□□□□ 0.68
COMMD1Q8N668 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.3■□□□□ 0.68
COMMD1Q8N668 MIR3960-201ENST00000583311 91 ntBASIC19.3■□□□□ 0.68
COMMD1Q8N668 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.3■□□□□ 0.68
COMMD1Q8N668 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COMMD1Q8N668 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.3■□□□□ 0.68
COMMD1Q8N668 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.3■□□□□ 0.68
COMMD1Q8N668 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.3■□□□□ 0.68
COMMD1Q8N668 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.3■□□□□ 0.68
COMMD1Q8N668 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
COMMD1Q8N668 AC142472.1-201ENST00000612013 1741 ntBASIC19.29■□□□□ 0.68
COMMD1Q8N668 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD1Q8N668 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD1Q8N668 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.29■□□□□ 0.68
COMMD1Q8N668 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD1Q8N668 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COMMD1Q8N668 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.28■□□□□ 0.68
COMMD1Q8N668 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.28■□□□□ 0.68
COMMD1Q8N668 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD1Q8N668 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.28■□□□□ 0.68
COMMD1Q8N668 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COMMD1Q8N668 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD1Q8N668 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD1Q8N668 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COMMD1Q8N668 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD1Q8N668 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD1Q8N668 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD1Q8N668 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COMMD1Q8N668 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD1Q8N668 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD1Q8N668 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COMMD1Q8N668 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COMMD1Q8N668 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COMMD1Q8N668 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms