Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RP1L1Q8IWN7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
RP1L1Q8IWN7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
RP1L1Q8IWN7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP1L1Q8IWN7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC21.43■■□□□ 1.02
RP1L1Q8IWN7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP1L1Q8IWN7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RP1L1Q8IWN7 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP1L1Q8IWN7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP1L1Q8IWN7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.42■■□□□ 1.02
RP1L1Q8IWN7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP1L1Q8IWN7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.42■■□□□ 1.02
RP1L1Q8IWN7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP1L1Q8IWN7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RP1L1Q8IWN7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 AC011551.1-201ENST00000614101 683 ntBASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 AC087623.3-201ENST00000607047 1098 ntBASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.41■■□□□ 1.02
RP1L1Q8IWN7 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.4■■□□□ 1.02
RP1L1Q8IWN7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
RP1L1Q8IWN7 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RP1L1Q8IWN7 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.4■■□□□ 1.02
RP1L1Q8IWN7 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RP1L1Q8IWN7 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
RP1L1Q8IWN7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.39■■□□□ 1.01
RP1L1Q8IWN7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RP1L1Q8IWN7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.39■■□□□ 1.01
RP1L1Q8IWN7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.39■■□□□ 1.01
RP1L1Q8IWN7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RP1L1Q8IWN7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.38■■□□□ 1.01
RP1L1Q8IWN7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.38■■□□□ 1.01
RP1L1Q8IWN7 AL031432.3-201ENST00000607698 485 ntBASIC21.38■■□□□ 1.01
RP1L1Q8IWN7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RP1L1Q8IWN7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RP1L1Q8IWN7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RP1L1Q8IWN7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RP1L1Q8IWN7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RP1L1Q8IWN7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.37■■□□□ 1.01
RP1L1Q8IWN7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RP1L1Q8IWN7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RP1L1Q8IWN7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RP1L1Q8IWN7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.36■■□□□ 1.01
RP1L1Q8IWN7 AC135279.3-201ENST00000610945 1311 ntBASIC21.36■■□□□ 1.01
RP1L1Q8IWN7 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
RP1L1Q8IWN7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RP1L1Q8IWN7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.34■■□□□ 1.01
RP1L1Q8IWN7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.34■■□□□ 1.01
RP1L1Q8IWN7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RP1L1Q8IWN7 PBX2P1-201ENST00000493219 1291 ntBASIC21.34■■□□□ 1.01
RP1L1Q8IWN7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC21.34■■□□□ 1.01
RP1L1Q8IWN7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RP1L1Q8IWN7 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
RP1L1Q8IWN7 EDA-201ENST00000338901 1233 ntBASIC21.33■■□□□ 1.01
RP1L1Q8IWN7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.33■■□□□ 1.01
RP1L1Q8IWN7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RP1L1Q8IWN7 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RP1L1Q8IWN7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.33■■□□□ 1
RP1L1Q8IWN7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.32■■□□□ 1
RP1L1Q8IWN7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RP1L1Q8IWN7 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RP1L1Q8IWN7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RP1L1Q8IWN7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RP1L1Q8IWN7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.32■■□□□ 1
RP1L1Q8IWN7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
RP1L1Q8IWN7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
RP1L1Q8IWN7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.32■■□□□ 1
RP1L1Q8IWN7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.32■■□□□ 1
RP1L1Q8IWN7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.32■■□□□ 1
RP1L1Q8IWN7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.31■■□□□ 1
RP1L1Q8IWN7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.31■■□□□ 1
RP1L1Q8IWN7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.31■■□□□ 1
RP1L1Q8IWN7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.31■■□□□ 1
RP1L1Q8IWN7 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.31■■□□□ 1
RP1L1Q8IWN7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.31■■□□□ 1
RP1L1Q8IWN7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RP1L1Q8IWN7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.31■■□□□ 1
RP1L1Q8IWN7 AF213884.3-201ENST00000563833 479 ntBASIC21.31■■□□□ 1
RP1L1Q8IWN7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.31■■□□□ 1
RP1L1Q8IWN7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.31■■□□□ 1
RP1L1Q8IWN7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RP1L1Q8IWN7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RP1L1Q8IWN7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.3■■□□□ 1
RP1L1Q8IWN7 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC21.3■■□□□ 1
RP1L1Q8IWN7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RP1L1Q8IWN7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.3■■□□□ 1
RP1L1Q8IWN7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RP1L1Q8IWN7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms