Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SFTPA1Q8IWL2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SFTPA1Q8IWL2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
SFTPA1Q8IWL2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.14■■□□□ 1.45
SFTPA1Q8IWL2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.13■■□□□ 1.45
SFTPA1Q8IWL2 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SFTPA1Q8IWL2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.12■■□□□ 1.45
SFTPA1Q8IWL2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
SFTPA1Q8IWL2 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
SFTPA1Q8IWL2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SFTPA1Q8IWL2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 AC096887.2-201ENST00000623443 1957 ntBASIC24.11■■□□□ 1.45
SFTPA1Q8IWL2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SFTPA1Q8IWL2 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SFTPA1Q8IWL2 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SFTPA1Q8IWL2 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC24.1■■□□□ 1.45
SFTPA1Q8IWL2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
SFTPA1Q8IWL2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
SFTPA1Q8IWL2 AC011551.1-201ENST00000614101 683 ntBASIC24.09■■□□□ 1.45
SFTPA1Q8IWL2 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 FOXO3B-201ENST00000395675 1928 ntBASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 AC131281.2-201ENST00000520478 145 ntBASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
SFTPA1Q8IWL2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SFTPA1Q8IWL2 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SFTPA1Q8IWL2 AF131216.4-201ENST00000638924 1588 ntBASIC24.08■■□□□ 1.44
SFTPA1Q8IWL2 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
SFTPA1Q8IWL2 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 AC010997.5-201ENST00000609182 354 ntBASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SFTPA1Q8IWL2 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SFTPA1Q8IWL2 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.05■■□□□ 1.44
SFTPA1Q8IWL2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.05■■□□□ 1.44
SFTPA1Q8IWL2 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.05■■□□□ 1.44
SFTPA1Q8IWL2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SFTPA1Q8IWL2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 AL117332.1-201ENST00000622628 974 ntBASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.04■■□□□ 1.44
SFTPA1Q8IWL2 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SFTPA1Q8IWL2 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.02■■□□□ 1.44
SFTPA1Q8IWL2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SFTPA1Q8IWL2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.02■■□□□ 1.44
SFTPA1Q8IWL2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.02■■□□□ 1.44
SFTPA1Q8IWL2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.02■■□□□ 1.44
SFTPA1Q8IWL2 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SFTPA1Q8IWL2 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SFTPA1Q8IWL2 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SFTPA1Q8IWL2 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SFTPA1Q8IWL2 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.01■■□□□ 1.43
SFTPA1Q8IWL2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SFTPA1Q8IWL2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms