Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.69■■□□□ 1.38
CDHR3Q6ZTQ4 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.69■■□□□ 1.38
CDHR3Q6ZTQ4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.69■■□□□ 1.38
CDHR3Q6ZTQ4 U85056.1-201ENST00000616429 682 ntBASIC23.69■■□□□ 1.38
CDHR3Q6ZTQ4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDHR3Q6ZTQ4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDHR3Q6ZTQ4 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDHR3Q6ZTQ4 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDHR3Q6ZTQ4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CDHR3Q6ZTQ4 AC007029.1-201ENST00000604183 313 ntBASIC23.68■■□□□ 1.38
CDHR3Q6ZTQ4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CDHR3Q6ZTQ4 AC025884.2-201ENST00000553429 711 ntBASIC23.67■■□□□ 1.38
CDHR3Q6ZTQ4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CDHR3Q6ZTQ4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.67■■□□□ 1.38
CDHR3Q6ZTQ4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.66■■□□□ 1.38
CDHR3Q6ZTQ4 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC23.66■■□□□ 1.38
CDHR3Q6ZTQ4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC23.66■■□□□ 1.38
CDHR3Q6ZTQ4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR3Q6ZTQ4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.66■■□□□ 1.38
CDHR3Q6ZTQ4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR3Q6ZTQ4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CDHR3Q6ZTQ4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CDHR3Q6ZTQ4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
CDHR3Q6ZTQ4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDHR3Q6ZTQ4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
CDHR3Q6ZTQ4 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
CDHR3Q6ZTQ4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.64■■□□□ 1.38
CDHR3Q6ZTQ4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.64■■□□□ 1.37
CDHR3Q6ZTQ4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CDHR3Q6ZTQ4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.64■■□□□ 1.37
CDHR3Q6ZTQ4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
CDHR3Q6ZTQ4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
CDHR3Q6ZTQ4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 AC133561.1-201ENST00000568600 2415 ntBASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CDHR3Q6ZTQ4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.62■■□□□ 1.37
CDHR3Q6ZTQ4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 LINC00543-201ENST00000567234 1845 ntBASIC23.61■■□□□ 1.37
CDHR3Q6ZTQ4 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CDHR3Q6ZTQ4 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.59■■□□□ 1.37
CDHR3Q6ZTQ4 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CDHR3Q6ZTQ4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CDHR3Q6ZTQ4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CDHR3Q6ZTQ4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDHR3Q6ZTQ4 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDHR3Q6ZTQ4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.58■■□□□ 1.37
CDHR3Q6ZTQ4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR3Q6ZTQ4 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR3Q6ZTQ4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR3Q6ZTQ4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
CDHR3Q6ZTQ4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CDHR3Q6ZTQ4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 AC009831.1-201ENST00000580420 1582 ntBASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 KRT18P60-201ENST00000312876 1297 ntBASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.57■■□□□ 1.36
CDHR3Q6ZTQ4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms