Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00575Q6W349 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00575Q6W349 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00575Q6W349 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00575Q6W349 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00575Q6W349 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LINC00575Q6W349 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC00575Q6W349 AC136428.2-201ENST00000563187 214 ntBASIC14.92□□□□□ -0.02
LINC00575Q6W349 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LINC00575Q6W349 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00575Q6W349 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00575Q6W349 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00575Q6W349 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00575Q6W349 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00575Q6W349 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00575Q6W349 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00575Q6W349 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00575Q6W349 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
LINC00575Q6W349 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC00575Q6W349 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00575Q6W349 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00575Q6W349 RPS2-210ENST00000530225 765 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00575Q6W349 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00575Q6W349 AL117328.2-201ENST00000624617 1940 ntBASIC14.91□□□□□ -0.02
LINC00575Q6W349 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00575Q6W349 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00575Q6W349 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00575Q6W349 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00575Q6W349 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00575Q6W349 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00575Q6W349 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 AC097358.2-201ENST00000607541 1159 ntBASIC14.9□□□□□ -0.02
LINC00575Q6W349 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00575Q6W349 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00575Q6W349 NFE2L3P1-201ENST00000588207 1959 ntBASIC14.89□□□□□ -0.03
LINC00575Q6W349 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00575Q6W349 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LINC00575Q6W349 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00575Q6W349 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00575Q6W349 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00575Q6W349 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LINC00575Q6W349 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00575Q6W349 C9orf163-202ENST00000624034 2573 ntBASIC14.88□□□□□ -0.03
LINC00575Q6W349 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00575Q6W349 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00575Q6W349 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00575Q6W349 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00575Q6W349 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00575Q6W349 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00575Q6W349 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00575Q6W349 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00575Q6W349 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00575Q6W349 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LINC00575Q6W349 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
LINC00575Q6W349 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00575Q6W349 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00575Q6W349 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00575Q6W349 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00575Q6W349 ABCB10P4-201ENST00000566803 2184 ntBASIC14.87□□□□□ -0.03
LINC00575Q6W349 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00575Q6W349 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00575Q6W349 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC14.86□□□□□ -0.03
LINC00575Q6W349 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00575Q6W349 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC14.86□□□□□ -0.03
LINC00575Q6W349 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00575Q6W349 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00575Q6W349 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00575Q6W349 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LINC00575Q6W349 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LINC00575Q6W349 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00575Q6W349 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00575Q6W349 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC14.85□□□□□ -0.03
LINC00575Q6W349 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
LINC00575Q6W349 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC14.85□□□□□ -0.03
LINC00575Q6W349 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LINC00575Q6W349 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00575Q6W349 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00575Q6W349 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00575Q6W349 SHD-204ENST00000599689 1729 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00575Q6W349 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
LINC00575Q6W349 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00575Q6W349 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00575Q6W349 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00575Q6W349 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00575Q6W349 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
LINC00575Q6W349 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00575Q6W349 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LINC00575Q6W349 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC14.84□□□□□ -0.03
LINC00575Q6W349 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC14.84□□□□□ -0.03
LINC00575Q6W349 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00575Q6W349 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00575Q6W349 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
LINC00575Q6W349 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LINC00575Q6W349 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms