Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQA1Q5Y7H0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
HLA-DQA1Q5Y7H0 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQA1Q5Y7H0 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
HLA-DQA1Q5Y7H0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.95■■□□□ 1.1
HLA-DQA1Q5Y7H0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.94■■□□□ 1.1
HLA-DQA1Q5Y7H0 AL592295.1-201ENST00000400984 884 ntBASIC21.94■■□□□ 1.1
HLA-DQA1Q5Y7H0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.94■■□□□ 1.1
HLA-DQA1Q5Y7H0 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HLA-DQA1Q5Y7H0 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC21.94■■□□□ 1.1
HLA-DQA1Q5Y7H0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HLA-DQA1Q5Y7H0 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 FOXO3B-201ENST00000395675 1928 ntBASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 YBX1P4-201ENST00000392794 808 ntBASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HLA-DQA1Q5Y7H0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 KRT8P33-201ENST00000508125 1423 ntBASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
HLA-DQA1Q5Y7H0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 AC022616.5-201ENST00000518796 181 ntBASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 PVT1_1.1-201ENST00000615125 194 ntBASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
HLA-DQA1Q5Y7H0 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HLA-DQA1Q5Y7H0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HLA-DQA1Q5Y7H0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DQA1Q5Y7H0 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DQA1Q5Y7H0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HLA-DQA1Q5Y7H0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.89■■□□□ 1.09
HLA-DQA1Q5Y7H0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HLA-DQA1Q5Y7H0 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA1Q5Y7H0 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA1Q5Y7H0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA1Q5Y7H0 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.87■■□□□ 1.09
HLA-DQA1Q5Y7H0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.87■■□□□ 1.09
HLA-DQA1Q5Y7H0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA1Q5Y7H0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HLA-DQA1Q5Y7H0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA1Q5Y7H0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA1Q5Y7H0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.86■■□□□ 1.09
HLA-DQA1Q5Y7H0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA1Q5Y7H0 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA1Q5Y7H0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HLA-DQA1Q5Y7H0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
HLA-DQA1Q5Y7H0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 MIR4508-201ENST00000584178 70 ntBASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.85■■□□□ 1.09
HLA-DQA1Q5Y7H0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA1Q5Y7H0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA1Q5Y7H0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA1Q5Y7H0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HLA-DQA1Q5Y7H0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
HLA-DQA1Q5Y7H0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
HLA-DQA1Q5Y7H0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms