Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH17Q12864 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDH17Q12864 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
CDH17Q12864 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.85■■□□□ 1.41
CDH17Q12864 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH17Q12864 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.84■■□□□ 1.41
CDH17Q12864 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH17Q12864 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH17Q12864 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC23.84■■□□□ 1.41
CDH17Q12864 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.84■■□□□ 1.41
CDH17Q12864 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH17Q12864 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH17Q12864 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.84■■□□□ 1.41
CDH17Q12864 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH17Q12864 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH17Q12864 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH17Q12864 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC23.83■■□□□ 1.41
CDH17Q12864 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH17Q12864 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH17Q12864 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CDH17Q12864 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.83■■□□□ 1.4
CDH17Q12864 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH17Q12864 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CDH17Q12864 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.82■■□□□ 1.4
CDH17Q12864 AC018755.3-202ENST00000596210 929 ntBASIC23.82■■□□□ 1.4
CDH17Q12864 MIR6089-201ENST00000616698 64 ntBASIC23.82■■□□□ 1.4
CDH17Q12864 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.82■■□□□ 1.4
CDH17Q12864 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CDH17Q12864 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH17Q12864 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH17Q12864 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH17Q12864 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH17Q12864 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDH17Q12864 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDH17Q12864 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.81■■□□□ 1.4
CDH17Q12864 FOXO3B-201ENST00000395675 1928 ntBASIC23.81■■□□□ 1.4
CDH17Q12864 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH17Q12864 SPCS2P3-201ENST00000500401 656 ntBASIC23.81■■□□□ 1.4
CDH17Q12864 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH17Q12864 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH17Q12864 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH17Q12864 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.8■■□□□ 1.4
CDH17Q12864 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH17Q12864 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH17Q12864 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC23.8■■□□□ 1.4
CDH17Q12864 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH17Q12864 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.8■■□□□ 1.4
CDH17Q12864 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CDH17Q12864 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH17Q12864 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CDH17Q12864 U85056.1-201ENST00000616429 682 ntBASIC23.79■■□□□ 1.4
CDH17Q12864 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.79■■□□□ 1.4
CDH17Q12864 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.78■■□□□ 1.4
CDH17Q12864 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDH17Q12864 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.78■■□□□ 1.4
CDH17Q12864 RPS2P7-201ENST00000447334 885 ntBASIC23.78■■□□□ 1.4
CDH17Q12864 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CDH17Q12864 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH17Q12864 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH17Q12864 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH17Q12864 BRD4-212ENST00000630599 726 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH17Q12864 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH17Q12864 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.77■■□□□ 1.4
CDH17Q12864 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH17Q12864 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH17Q12864 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CDH17Q12864 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH17Q12864 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH17Q12864 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH17Q12864 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
CDH17Q12864 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.76■■□□□ 1.39
CDH17Q12864 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH17Q12864 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH17Q12864 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH17Q12864 DUX4L9-201ENST00000449051 1259 ntBASIC23.75■■□□□ 1.39
CDH17Q12864 MIR6765-201ENST00000614092 87 ntBASIC23.75■■□□□ 1.39
CDH17Q12864 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH17Q12864 LINC01124-201ENST00000409786 2117 ntBASIC23.75■■□□□ 1.39
CDH17Q12864 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH17Q12864 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH17Q12864 IDNK-203ENST00000405990 629 ntTSL 2 BASIC23.74■■□□□ 1.39
CDH17Q12864 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
CDH17Q12864 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDH17Q12864 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CDH17Q12864 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH17Q12864 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CDH17Q12864 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH17Q12864 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
CDH17Q12864 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.73■■□□□ 1.39
CDH17Q12864 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CDH17Q12864 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH17Q12864 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH17Q12864 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC23.72■■□□□ 1.39
CDH17Q12864 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC23.72■■□□□ 1.39
CDH17Q12864 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH17Q12864 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH17Q12864 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH17Q12864 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH17Q12864 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.72■■□□□ 1.39
CDH17Q12864 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms