Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CFHR3Q02985 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CFHR3Q02985 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.5■□□□□ 0.55
CFHR3Q02985 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CFHR3Q02985 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CFHR3Q02985 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
CFHR3Q02985 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CFHR3Q02985 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CFHR3Q02985 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CFHR3Q02985 AL451085.2-201ENST00000605085 799 ntBASIC18.49■□□□□ 0.55
CFHR3Q02985 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
CFHR3Q02985 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.49■□□□□ 0.55
CFHR3Q02985 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFHR3Q02985 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CFHR3Q02985 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CFHR3Q02985 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CFHR3Q02985 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.49■□□□□ 0.55
CFHR3Q02985 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CFHR3Q02985 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFHR3Q02985 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFHR3Q02985 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC18.48■□□□□ 0.55
CFHR3Q02985 AL031848.2-201ENST00000607670 837 ntBASIC18.48■□□□□ 0.55
CFHR3Q02985 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFHR3Q02985 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CFHR3Q02985 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CFHR3Q02985 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CFHR3Q02985 KRT18P24-201ENST00000344739 1156 ntBASIC18.47■□□□□ 0.55
CFHR3Q02985 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CFHR3Q02985 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CFHR3Q02985 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.47■□□□□ 0.55
CFHR3Q02985 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CFHR3Q02985 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.46■□□□□ 0.55
CFHR3Q02985 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CFHR3Q02985 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CFHR3Q02985 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CFHR3Q02985 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.45■□□□□ 0.54
CFHR3Q02985 AC120024.1-201ENST00000562672 995 ntBASIC18.45■□□□□ 0.54
CFHR3Q02985 AC011551.1-201ENST00000614101 683 ntBASIC18.45■□□□□ 0.54
CFHR3Q02985 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CFHR3Q02985 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CFHR3Q02985 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CFHR3Q02985 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CFHR3Q02985 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.44■□□□□ 0.54
CFHR3Q02985 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CFHR3Q02985 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
CFHR3Q02985 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CFHR3Q02985 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.44■□□□□ 0.54
CFHR3Q02985 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.44■□□□□ 0.54
CFHR3Q02985 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.44■□□□□ 0.54
CFHR3Q02985 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CFHR3Q02985 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CFHR3Q02985 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CFHR3Q02985 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CFHR3Q02985 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CFHR3Q02985 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.43■□□□□ 0.54
CFHR3Q02985 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CFHR3Q02985 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CFHR3Q02985 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.42■□□□□ 0.54
CFHR3Q02985 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC18.42■□□□□ 0.54
CFHR3Q02985 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CFHR3Q02985 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.42■□□□□ 0.54
CFHR3Q02985 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CFHR3Q02985 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.42■□□□□ 0.54
CFHR3Q02985 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CFHR3Q02985 AC009299.2-201ENST00000482477 511 ntBASIC18.42■□□□□ 0.54
CFHR3Q02985 THA1P-201ENST00000590384 1145 ntBASIC18.42■□□□□ 0.54
CFHR3Q02985 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CFHR3Q02985 AL035685.1-201ENST00000636663 812 ntBASIC18.42■□□□□ 0.54
CFHR3Q02985 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CFHR3Q02985 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CFHR3Q02985 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.41■□□□□ 0.54
CFHR3Q02985 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFHR3Q02985 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFHR3Q02985 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CFHR3Q02985 SLC6A10P-202ENST00000431994 2058 ntBASIC18.41■□□□□ 0.54
CFHR3Q02985 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.41■□□□□ 0.54
CFHR3Q02985 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
CFHR3Q02985 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.4■□□□□ 0.54
CFHR3Q02985 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFHR3Q02985 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFHR3Q02985 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFHR3Q02985 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.4■□□□□ 0.54
CFHR3Q02985 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFHR3Q02985 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFHR3Q02985 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CFHR3Q02985 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.4■□□□□ 0.54
CFHR3Q02985 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.54
CFHR3Q02985 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CFHR3Q02985 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CFHR3Q02985 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFHR3Q02985 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CFHR3Q02985 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CFHR3Q02985 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.39■□□□□ 0.53
CFHR3Q02985 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CFHR3Q02985 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CFHR3Q02985 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CFHR3Q02985 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFHR3Q02985 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CFHR3Q02985 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.38■□□□□ 0.53
CFHR3Q02985 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms