Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SPCS3P61009 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SPCS3P61009 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.05■□□□□ 0.64
SPCS3P61009 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SPCS3P61009 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS3P61009 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS3P61009 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
SPCS3P61009 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
SPCS3P61009 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS3P61009 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS3P61009 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS3P61009 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.04■□□□□ 0.64
SPCS3P61009 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS3P61009 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SPCS3P61009 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS3P61009 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS3P61009 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
SPCS3P61009 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS3P61009 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS3P61009 CR559946.2-201ENST00000623684 991 ntBASIC19.03■□□□□ 0.64
SPCS3P61009 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS3P61009 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SPCS3P61009 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SPCS3P61009 AC141586.4-201ENST00000624558 1573 ntBASIC19.02■□□□□ 0.64
SPCS3P61009 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.02■□□□□ 0.64
SPCS3P61009 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.02■□□□□ 0.64
SPCS3P61009 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPCS3P61009 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SPCS3P61009 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.02■□□□□ 0.64
SPCS3P61009 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.02■□□□□ 0.64
SPCS3P61009 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPCS3P61009 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPCS3P61009 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SPCS3P61009 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SPCS3P61009 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPCS3P61009 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPCS3P61009 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPCS3P61009 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SPCS3P61009 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPCS3P61009 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPCS3P61009 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19■□□□□ 0.63
SPCS3P61009 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPCS3P61009 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPCS3P61009 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SPCS3P61009 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
SPCS3P61009 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SPCS3P61009 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.99■□□□□ 0.63
SPCS3P61009 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPCS3P61009 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.98■□□□□ 0.63
SPCS3P61009 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPCS3P61009 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.98■□□□□ 0.63
SPCS3P61009 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPCS3P61009 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
SPCS3P61009 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPCS3P61009 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPCS3P61009 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SPCS3P61009 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SPCS3P61009 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SPCS3P61009 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPCS3P61009 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPCS3P61009 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPCS3P61009 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPCS3P61009 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.97■□□□□ 0.63
SPCS3P61009 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPCS3P61009 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPCS3P61009 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPCS3P61009 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SPCS3P61009 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC18.96■□□□□ 0.63
SPCS3P61009 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.96■□□□□ 0.63
SPCS3P61009 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.96■□□□□ 0.63
SPCS3P61009 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPCS3P61009 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.95■□□□□ 0.62
SPCS3P61009 MIR3648-2-201ENST00000581792 180 ntBASIC18.95■□□□□ 0.62
SPCS3P61009 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.95■□□□□ 0.62
SPCS3P61009 MIR3648-1-201ENST00000615959 180 ntBASIC18.95■□□□□ 0.62
SPCS3P61009 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.95■□□□□ 0.62
SPCS3P61009 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPCS3P61009 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SPCS3P61009 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SPCS3P61009 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms