Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SAA4P35542 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SAA4P35542 DUSP8P4-201ENST00000399538 1761 ntBASIC19.16■□□□□ 0.66
SAA4P35542 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.16■□□□□ 0.66
SAA4P35542 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SAA4P35542 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SAA4P35542 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SAA4P35542 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SAA4P35542 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SAA4P35542 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SAA4P35542 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.15■□□□□ 0.66
SAA4P35542 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SAA4P35542 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SAA4P35542 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SAA4P35542 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC19.15■□□□□ 0.66
SAA4P35542 AC145676.1-201ENST00000514988 2004 ntBASIC19.15■□□□□ 0.66
SAA4P35542 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SAA4P35542 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SAA4P35542 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.14■□□□□ 0.65
SAA4P35542 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SAA4P35542 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SAA4P35542 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SAA4P35542 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SAA4P35542 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SAA4P35542 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SAA4P35542 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.13■□□□□ 0.65
SAA4P35542 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SAA4P35542 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SAA4P35542 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SAA4P35542 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.12■□□□□ 0.65
SAA4P35542 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.12■□□□□ 0.65
SAA4P35542 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SAA4P35542 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SAA4P35542 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SAA4P35542 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SAA4P35542 AC011551.1-201ENST00000614101 683 ntBASIC19.11■□□□□ 0.65
SAA4P35542 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SAA4P35542 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SAA4P35542 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SAA4P35542 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SAA4P35542 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.1■□□□□ 0.65
SAA4P35542 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SAA4P35542 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.1■□□□□ 0.65
SAA4P35542 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SAA4P35542 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.1■□□□□ 0.65
SAA4P35542 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
SAA4P35542 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SAA4P35542 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SAA4P35542 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SAA4P35542 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.1■□□□□ 0.65
SAA4P35542 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
SAA4P35542 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SAA4P35542 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SAA4P35542 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.09■□□□□ 0.65
SAA4P35542 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SAA4P35542 BX664725.1-201ENST00000438252 379 ntBASIC19.09■□□□□ 0.65
SAA4P35542 AC239859.2-201ENST00000444165 318 ntBASIC19.09■□□□□ 0.65
SAA4P35542 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.09■□□□□ 0.65
SAA4P35542 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SAA4P35542 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.09■□□□□ 0.65
SAA4P35542 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.09■□□□□ 0.65
SAA4P35542 MIR4281-201ENST00000580852 62 ntBASIC19.09■□□□□ 0.65
SAA4P35542 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SAA4P35542 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.09■□□□□ 0.65
SAA4P35542 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SAA4P35542 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SAA4P35542 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SAA4P35542 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SAA4P35542 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.08■□□□□ 0.65
SAA4P35542 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SAA4P35542 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SAA4P35542 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
SAA4P35542 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA4P35542 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA4P35542 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SAA4P35542 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
SAA4P35542 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.08■□□□□ 0.64
SAA4P35542 Z92544.1-202ENST00000571933 1220 ntBASIC19.08■□□□□ 0.64
SAA4P35542 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SAA4P35542 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA4P35542 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA4P35542 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.08■□□□□ 0.64
SAA4P35542 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SAA4P35542 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SAA4P35542 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SAA4P35542 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SAA4P35542 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SAA4P35542 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SAA4P35542 KRT125P-201ENST00000546827 989 ntBASIC19.07■□□□□ 0.64
SAA4P35542 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.07■□□□□ 0.64
SAA4P35542 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SAA4P35542 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SAA4P35542 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SAA4P35542 GUSBP5-201ENST00000418136 578 ntBASIC19.06■□□□□ 0.64
SAA4P35542 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.06■□□□□ 0.64
SAA4P35542 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SAA4P35542 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SAA4P35542 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.05■□□□□ 0.64
SAA4P35542 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SAA4P35542 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms