Protein–RNA interactions for Protein: P0DJD0

RGPD1, RANBP2-like and GRIP domain-containing protein 1, humanhuman

Predictions only

Length 1,748 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1P0DJD0 AC135279.3-201ENST00000610945 1311 ntBASIC31.96■■■□□ 2.71
RGPD1P0DJD0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
RGPD1P0DJD0 MIR3621-201ENST00000580529 85 ntBASIC31.96■■■□□ 2.71
RGPD1P0DJD0 AC092028.1-203ENST00000608262 953 ntBASIC31.96■■■□□ 2.71
RGPD1P0DJD0 AL512631.2-201ENST00000604634 923 ntBASIC31.95■■■□□ 2.71
RGPD1P0DJD0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
RGPD1P0DJD0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
RGPD1P0DJD0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
RGPD1P0DJD0 KRT18P10-201ENST00000388836 1287 ntBASIC31.95■■■□□ 2.7
RGPD1P0DJD0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.95■■■□□ 2.7
RGPD1P0DJD0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RGPD1P0DJD0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.94■■■□□ 2.7
RGPD1P0DJD0 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
RGPD1P0DJD0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
RGPD1P0DJD0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
RGPD1P0DJD0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC31.93■■■□□ 2.7
RGPD1P0DJD0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RGPD1P0DJD0 MIR5787-201ENST00000611784 55 ntBASIC31.93■■■□□ 2.7
RGPD1P0DJD0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.93■■■□□ 2.7
RGPD1P0DJD0 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
RGPD1P0DJD0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC31.92■■■□□ 2.7
RGPD1P0DJD0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
RGPD1P0DJD0 MIR6724-1-201ENST00000616420 92 ntBASIC31.92■■■□□ 2.7
RGPD1P0DJD0 MIR6724-2-201ENST00000616483 92 ntBASIC31.92■■■□□ 2.7
RGPD1P0DJD0 MIR6724-4-201ENST00000617390 92 ntBASIC31.92■■■□□ 2.7
RGPD1P0DJD0 MIR6724-3-201ENST00000622482 92 ntBASIC31.92■■■□□ 2.7
RGPD1P0DJD0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
RGPD1P0DJD0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC31.92■■■□□ 2.7
RGPD1P0DJD0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.91■■■□□ 2.7
RGPD1P0DJD0 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
RGPD1P0DJD0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
RGPD1P0DJD0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.9■■■□□ 2.7
RGPD1P0DJD0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RGPD1P0DJD0 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
RGPD1P0DJD0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.9■■■□□ 2.7
RGPD1P0DJD0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
RGPD1P0DJD0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
RGPD1P0DJD0 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.89■■■□□ 2.7
RGPD1P0DJD0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
RGPD1P0DJD0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
RGPD1P0DJD0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC31.89■■■□□ 2.69
RGPD1P0DJD0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.69
RGPD1P0DJD0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RGPD1P0DJD0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.88■■■□□ 2.69
RGPD1P0DJD0 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RGPD1P0DJD0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC31.88■■■□□ 2.69
RGPD1P0DJD0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC31.88■■■□□ 2.69
RGPD1P0DJD0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
RGPD1P0DJD0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
RGPD1P0DJD0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC31.87■■■□□ 2.69
RGPD1P0DJD0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC31.87■■■□□ 2.69
RGPD1P0DJD0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RGPD1P0DJD0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC31.86■■■□□ 2.69
RGPD1P0DJD0 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.86■■■□□ 2.69
RGPD1P0DJD0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC31.86■■■□□ 2.69
RGPD1P0DJD0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
RGPD1P0DJD0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.86■■■□□ 2.69
RGPD1P0DJD0 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC31.86■■■□□ 2.69
RGPD1P0DJD0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC31.85■■■□□ 2.69
RGPD1P0DJD0 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
RGPD1P0DJD0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
RGPD1P0DJD0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
RGPD1P0DJD0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
RGPD1P0DJD0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC31.83■■■□□ 2.69
RGPD1P0DJD0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC31.83■■■□□ 2.69
RGPD1P0DJD0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
RGPD1P0DJD0 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC31.83■■■□□ 2.69
RGPD1P0DJD0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC31.83■■■□□ 2.69
RGPD1P0DJD0 MIR4281-201ENST00000580852 62 ntBASIC31.83■■■□□ 2.69
RGPD1P0DJD0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
RGPD1P0DJD0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.82■■■□□ 2.68
RGPD1P0DJD0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.68
RGPD1P0DJD0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.82■■■□□ 2.68
RGPD1P0DJD0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC31.82■■■□□ 2.68
RGPD1P0DJD0 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
RGPD1P0DJD0 MTDHP2-201ENST00000601468 714 ntBASIC31.81■■■□□ 2.68
RGPD1P0DJD0 AC106739.1-201ENST00000617035 715 ntBASIC31.8■■■□□ 2.68
RGPD1P0DJD0 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
RGPD1P0DJD0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC31.8■■■□□ 2.68
RGPD1P0DJD0 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
RGPD1P0DJD0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
RGPD1P0DJD0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
RGPD1P0DJD0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.8■■■□□ 2.68
RGPD1P0DJD0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD1P0DJD0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD1P0DJD0 SUDS3P1-201ENST00000505831 966 ntBASIC31.79■■■□□ 2.68
RGPD1P0DJD0 AC010997.5-201ENST00000609182 354 ntBASIC31.79■■■□□ 2.68
RGPD1P0DJD0 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
RGPD1P0DJD0 AC096887.2-201ENST00000623443 1957 ntBASIC31.79■■■□□ 2.68
RGPD1P0DJD0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.78■■■□□ 2.68
RGPD1P0DJD0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC31.78■■■□□ 2.68
RGPD1P0DJD0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
RGPD1P0DJD0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.77■■■□□ 2.68
RGPD1P0DJD0 AC142381.2-201ENST00000566120 298 ntBASIC31.77■■■□□ 2.68
RGPD1P0DJD0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC31.76■■■□□ 2.67
RGPD1P0DJD0 AC120024.1-201ENST00000562672 995 ntBASIC31.76■■■□□ 2.67
RGPD1P0DJD0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC31.76■■■□□ 2.67
RGPD1P0DJD0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC31.76■■■□□ 2.67
RGPD1P0DJD0 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RGPD1P0DJD0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms