Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.61■□□□□ 0.89
UBCP0CG48 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.61■□□□□ 0.89
UBCP0CG48 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.61■□□□□ 0.89
UBCP0CG48 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBCP0CG48 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
UBCP0CG48 LINC00543-201ENST00000567234 1845 ntBASIC20.6■□□□□ 0.89
UBCP0CG48 AC141586.4-201ENST00000624558 1573 ntBASIC20.6■□□□□ 0.89
UBCP0CG48 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
UBCP0CG48 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.6■□□□□ 0.89
UBCP0CG48 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBCP0CG48 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.6■□□□□ 0.89
UBCP0CG48 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBCP0CG48 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBCP0CG48 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
UBCP0CG48 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.6■□□□□ 0.89
UBCP0CG48 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.6■□□□□ 0.89
UBCP0CG48 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBCP0CG48 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBCP0CG48 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBCP0CG48 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBCP0CG48 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBCP0CG48 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBCP0CG48 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBCP0CG48 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UBCP0CG48 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.59■□□□□ 0.89
UBCP0CG48 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.59■□□□□ 0.89
UBCP0CG48 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBCP0CG48 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBCP0CG48 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBCP0CG48 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.58■□□□□ 0.89
UBCP0CG48 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.58■□□□□ 0.89
UBCP0CG48 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.58■□□□□ 0.89
UBCP0CG48 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBCP0CG48 AC012676.1-201ENST00000574705 1949 ntBASIC20.58■□□□□ 0.88
UBCP0CG48 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBCP0CG48 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
UBCP0CG48 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 ECEL1P2-201ENST00000461596 1295 ntBASIC20.57■□□□□ 0.88
UBCP0CG48 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 MIR7108-201ENST00000614319 87 ntBASIC20.57■□□□□ 0.88
UBCP0CG48 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBCP0CG48 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.57■□□□□ 0.88
UBCP0CG48 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
UBCP0CG48 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
UBCP0CG48 RP9P-202ENST00000450133 1212 ntBASIC20.56■□□□□ 0.88
UBCP0CG48 MIR6089-201ENST00000616698 64 ntBASIC20.56■□□□□ 0.88
UBCP0CG48 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBCP0CG48 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBCP0CG48 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBCP0CG48 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBCP0CG48 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBCP0CG48 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBCP0CG48 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBCP0CG48 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
UBCP0CG48 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBCP0CG48 MIR639-201ENST00000384974 98 ntBASIC20.55■□□□□ 0.88
UBCP0CG48 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.55■□□□□ 0.88
UBCP0CG48 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBCP0CG48 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
UBCP0CG48 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBCP0CG48 AC133561.1-201ENST00000568600 2415 ntBASIC20.55■□□□□ 0.88
UBCP0CG48 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBCP0CG48 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBCP0CG48 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.54■□□□□ 0.88
UBCP0CG48 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.54■□□□□ 0.88
UBCP0CG48 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBCP0CG48 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBCP0CG48 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBCP0CG48 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
UBCP0CG48 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.53■□□□□ 0.88
UBCP0CG48 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBCP0CG48 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBCP0CG48 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBCP0CG48 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
UBCP0CG48 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.52■□□□□ 0.88
UBCP0CG48 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.52■□□□□ 0.88
UBCP0CG48 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.52■□□□□ 0.88
UBCP0CG48 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBCP0CG48 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
UBCP0CG48 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.52■□□□□ 0.88
UBCP0CG48 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBCP0CG48 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
UBCP0CG48 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBCP0CG48 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBCP0CG48 AC022413.1-201ENST00000624602 984 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms