Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC1P02654 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC1P02654 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOC1P02654 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
APOC1P02654 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.7■□□□□ 0.9
APOC1P02654 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APOC1P02654 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC1P02654 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APOC1P02654 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APOC1P02654 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOC1P02654 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOC1P02654 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOC1P02654 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.69■□□□□ 0.9
APOC1P02654 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOC1P02654 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.69■□□□□ 0.9
APOC1P02654 RAP2CP1-202ENST00000605179 643 ntBASIC20.69■□□□□ 0.9
APOC1P02654 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.69■□□□□ 0.9
APOC1P02654 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APOC1P02654 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC1P02654 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC1P02654 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC1P02654 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
APOC1P02654 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC1P02654 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
APOC1P02654 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC20.68■□□□□ 0.9
APOC1P02654 AC138932.3-201ENST00000567634 1902 ntBASIC20.68■□□□□ 0.9
APOC1P02654 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
APOC1P02654 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC1P02654 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC1P02654 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
APOC1P02654 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APOC1P02654 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC1P02654 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.67■□□□□ 0.9
APOC1P02654 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC1P02654 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
APOC1P02654 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
APOC1P02654 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.67■□□□□ 0.9
APOC1P02654 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.67■□□□□ 0.9
APOC1P02654 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.67■□□□□ 0.9
APOC1P02654 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC1P02654 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
APOC1P02654 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.67■□□□□ 0.9
APOC1P02654 SLC6A10P-202ENST00000431994 2058 ntBASIC20.66■□□□□ 0.9
APOC1P02654 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
APOC1P02654 AC026202.3-201ENST00000600805 1127 ntBASIC20.66■□□□□ 0.9
APOC1P02654 RNF126P1-201ENST00000567452 1320 ntBASIC20.66■□□□□ 0.9
APOC1P02654 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.66■□□□□ 0.9
APOC1P02654 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
APOC1P02654 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
APOC1P02654 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
APOC1P02654 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
APOC1P02654 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC1P02654 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC1P02654 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC1P02654 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC1P02654 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
APOC1P02654 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
APOC1P02654 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
APOC1P02654 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
APOC1P02654 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOC1P02654 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.64■□□□□ 0.89
APOC1P02654 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOC1P02654 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
APOC1P02654 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOC1P02654 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
APOC1P02654 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
APOC1P02654 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.64■□□□□ 0.89
APOC1P02654 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
APOC1P02654 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOC1P02654 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOC1P02654 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
APOC1P02654 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOC1P02654 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOC1P02654 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
APOC1P02654 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
APOC1P02654 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOC1P02654 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.62■□□□□ 0.89
APOC1P02654 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
APOC1P02654 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOC1P02654 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
APOC1P02654 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
APOC1P02654 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
APOC1P02654 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOC1P02654 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
APOC1P02654 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
APOC1P02654 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.6■□□□□ 0.89
APOC1P02654 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.6■□□□□ 0.89
APOC1P02654 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.6■□□□□ 0.89
APOC1P02654 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOC1P02654 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
APOC1P02654 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOC1P02654 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
APOC1P02654 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOC1P02654 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
APOC1P02654 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.6■□□□□ 0.89
APOC1P02654 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.6■□□□□ 0.89
APOC1P02654 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOC1P02654 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOC1P02654 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
APOC1P02654 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms