Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SOD1P00441 AL035685.1-201ENST00000636663 812 ntBASIC23.44■■□□□ 1.34
SOD1P00441 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SOD1P00441 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SOD1P00441 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SOD1P00441 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.43■■□□□ 1.34
SOD1P00441 AC009299.2-201ENST00000482477 511 ntBASIC23.43■■□□□ 1.34
SOD1P00441 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SOD1P00441 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
SOD1P00441 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.42■■□□□ 1.34
SOD1P00441 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
SOD1P00441 KRT18P24-201ENST00000344739 1156 ntBASIC23.41■■□□□ 1.34
SOD1P00441 AC120024.1-201ENST00000562672 995 ntBASIC23.41■■□□□ 1.34
SOD1P00441 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
SOD1P00441 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SOD1P00441 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.4■■□□□ 1.34
SOD1P00441 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.4■■□□□ 1.34
SOD1P00441 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.4■■□□□ 1.34
SOD1P00441 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
SOD1P00441 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SOD1P00441 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
SOD1P00441 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
SOD1P00441 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SOD1P00441 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SOD1P00441 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
SOD1P00441 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.39■■□□□ 1.33
SOD1P00441 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
SOD1P00441 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
SOD1P00441 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
SOD1P00441 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SOD1P00441 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
SOD1P00441 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
SOD1P00441 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
SOD1P00441 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SOD1P00441 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
SOD1P00441 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SOD1P00441 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SOD1P00441 SLC6A10P-202ENST00000431994 2058 ntBASIC23.36■■□□□ 1.33
SOD1P00441 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SOD1P00441 THA1P-201ENST00000590384 1145 ntBASIC23.36■■□□□ 1.33
SOD1P00441 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC23.36■■□□□ 1.33
SOD1P00441 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.35■■□□□ 1.33
SOD1P00441 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SOD1P00441 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SOD1P00441 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
SOD1P00441 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
SOD1P00441 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
SOD1P00441 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SOD1P00441 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SOD1P00441 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.34■■□□□ 1.33
SOD1P00441 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.34■■□□□ 1.33
SOD1P00441 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SOD1P00441 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SOD1P00441 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SOD1P00441 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.34■■□□□ 1.33
SOD1P00441 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
SOD1P00441 AC011551.1-201ENST00000614101 683 ntBASIC23.34■■□□□ 1.33
SOD1P00441 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.34■■□□□ 1.33
SOD1P00441 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC23.33■■□□□ 1.33
SOD1P00441 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SOD1P00441 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SOD1P00441 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SOD1P00441 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SOD1P00441 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.32
SOD1P00441 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.32■■□□□ 1.32
SOD1P00441 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.32■■□□□ 1.32
SOD1P00441 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.32■■□□□ 1.32
SOD1P00441 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.32■■□□□ 1.32
SOD1P00441 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.32■■□□□ 1.32
SOD1P00441 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SOD1P00441 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC23.31■■□□□ 1.32
SOD1P00441 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SOD1P00441 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SOD1P00441 MIR4281-201ENST00000580852 62 ntBASIC23.31■■□□□ 1.32
SOD1P00441 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.31■■□□□ 1.32
SOD1P00441 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.31■■□□□ 1.32
SOD1P00441 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
SOD1P00441 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.3■■□□□ 1.32
SOD1P00441 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SOD1P00441 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
SOD1P00441 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.3■■□□□ 1.32
SOD1P00441 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
SOD1P00441 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.3■■□□□ 1.32
SOD1P00441 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.3■■□□□ 1.32
SOD1P00441 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.3■■□□□ 1.32
SOD1P00441 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC23.3■■□□□ 1.32
SOD1P00441 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOD1P00441 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SOD1P00441 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
SOD1P00441 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SOD1P00441 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.29■■□□□ 1.32
SOD1P00441 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOD1P00441 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
SOD1P00441 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
SOD1P00441 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOD1P00441 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOD1P00441 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.29■■□□□ 1.32
SOD1P00441 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
SOD1P00441 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
SOD1P00441 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms