Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.71■□□□□ 0.75
SIX6O95475 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIX6O95475 LINC00565-201ENST00000562710 2331 ntBASIC19.71■□□□□ 0.75
SIX6O95475 AC110285.7-201ENST00000624417 1536 ntBASIC19.71■□□□□ 0.75
SIX6O95475 EP400NL-214ENST00000641289 2402 ntBASIC19.71■□□□□ 0.75
SIX6O95475 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.71■□□□□ 0.75
SIX6O95475 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX6O95475 CAHM-201ENST00000604200 896 ntBASIC19.7■□□□□ 0.74
SIX6O95475 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX6O95475 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIX6O95475 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX6O95475 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX6O95475 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX6O95475 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIX6O95475 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SIX6O95475 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SIX6O95475 AL024507.2-201ENST00000606070 2574 ntBASIC19.69■□□□□ 0.74
SIX6O95475 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIX6O95475 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX6O95475 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIX6O95475 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIX6O95475 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX6O95475 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.68■□□□□ 0.74
SIX6O95475 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX6O95475 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIX6O95475 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SIX6O95475 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX6O95475 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX6O95475 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.67■□□□□ 0.74
SIX6O95475 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX6O95475 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SIX6O95475 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.67■□□□□ 0.74
SIX6O95475 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIX6O95475 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX6O95475 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX6O95475 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.66■□□□□ 0.74
SIX6O95475 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SIX6O95475 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX6O95475 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
SIX6O95475 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SIX6O95475 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX6O95475 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.65■□□□□ 0.74
SIX6O95475 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX6O95475 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX6O95475 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.65■□□□□ 0.74
SIX6O95475 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.65■□□□□ 0.74
SIX6O95475 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.65■□□□□ 0.74
SIX6O95475 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SIX6O95475 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SIX6O95475 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SIX6O95475 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.65■□□□□ 0.74
SIX6O95475 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SIX6O95475 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SIX6O95475 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.64■□□□□ 0.74
SIX6O95475 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SIX6O95475 MIR762-201ENST00000390236 83 ntBASIC19.64■□□□□ 0.73
SIX6O95475 MIR6090-201ENST00000622481 60 ntBASIC19.64■□□□□ 0.73
SIX6O95475 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SIX6O95475 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SIX6O95475 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX6O95475 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX6O95475 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SIX6O95475 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SIX6O95475 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIX6O95475 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.63■□□□□ 0.73
SIX6O95475 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SIX6O95475 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SIX6O95475 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SIX6O95475 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX6O95475 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SIX6O95475 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SIX6O95475 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX6O95475 AC108673.1-201ENST00000510422 1159 ntBASIC19.62■□□□□ 0.73
SIX6O95475 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.62■□□□□ 0.73
SIX6O95475 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SIX6O95475 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIX6O95475 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.61■□□□□ 0.73
SIX6O95475 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIX6O95475 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SIX6O95475 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SIX6O95475 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SIX6O95475 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX6O95475 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX6O95475 AC233723.2-201ENST00000623798 2106 ntBASIC19.6■□□□□ 0.73
SIX6O95475 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC19.6■□□□□ 0.73
SIX6O95475 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SIX6O95475 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SIX6O95475 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SIX6O95475 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX6O95475 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX6O95475 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SIX6O95475 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms