Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.92■□□□□ 0.94
CDRT1O95170 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDRT1O95170 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CDRT1O95170 RPS2P35-201ENST00000443417 897 ntBASIC20.92■□□□□ 0.94
CDRT1O95170 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CDRT1O95170 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CDRT1O95170 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDRT1O95170 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDRT1O95170 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDRT1O95170 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDRT1O95170 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CDRT1O95170 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CDRT1O95170 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDRT1O95170 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.91■□□□□ 0.94
CDRT1O95170 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CDRT1O95170 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDRT1O95170 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDRT1O95170 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.9■□□□□ 0.94
CDRT1O95170 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDRT1O95170 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDRT1O95170 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.9■□□□□ 0.94
CDRT1O95170 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.9■□□□□ 0.94
CDRT1O95170 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.9■□□□□ 0.94
CDRT1O95170 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.9■□□□□ 0.94
CDRT1O95170 LINC01971-201ENST00000617888 1048 ntBASIC20.9■□□□□ 0.94
CDRT1O95170 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CDRT1O95170 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDRT1O95170 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CDRT1O95170 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CDRT1O95170 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDRT1O95170 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDRT1O95170 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.89■□□□□ 0.94
CDRT1O95170 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CDRT1O95170 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CDRT1O95170 C9orf163-202ENST00000624034 2573 ntBASIC20.89■□□□□ 0.93
CDRT1O95170 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.89■□□□□ 0.93
CDRT1O95170 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.89■□□□□ 0.93
CDRT1O95170 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDRT1O95170 AC004812.2-201ENST00000611079 2094 ntBASIC20.89■□□□□ 0.93
CDRT1O95170 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CDRT1O95170 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDRT1O95170 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDRT1O95170 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDRT1O95170 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDRT1O95170 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDRT1O95170 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDRT1O95170 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDRT1O95170 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CDRT1O95170 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDRT1O95170 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDRT1O95170 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.87■□□□□ 0.93
CDRT1O95170 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDRT1O95170 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDRT1O95170 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.86■□□□□ 0.93
CDRT1O95170 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDRT1O95170 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDRT1O95170 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L13-201ENST00000554103 1267 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L15-201ENST00000611059 1267 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L23-201ENST00000615195 1269 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L24-201ENST00000617576 1269 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L22-201ENST00000618238 1269 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L20-201ENST00000619712 1269 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L21-201ENST00000622058 1269 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L10-201ENST00000622460 1267 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 DUX4L25-201ENST00000624915 1269 ntBASIC20.86■□□□□ 0.93
CDRT1O95170 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDRT1O95170 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CDRT1O95170 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDRT1O95170 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDRT1O95170 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CDRT1O95170 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CDRT1O95170 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDRT1O95170 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
CDRT1O95170 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CDRT1O95170 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDRT1O95170 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDRT1O95170 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDRT1O95170 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDRT1O95170 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDRT1O95170 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.84■□□□□ 0.93
CDRT1O95170 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.84■□□□□ 0.93
CDRT1O95170 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDRT1O95170 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDRT1O95170 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDRT1O95170 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDRT1O95170 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDRT1O95170 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CDRT1O95170 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDRT1O95170 ABCB10P4-201ENST00000566803 2184 ntBASIC20.83■□□□□ 0.92
CDRT1O95170 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.83■□□□□ 0.92
CDRT1O95170 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDRT1O95170 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms