Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN3O60637 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
TSPAN3O60637 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN3O60637 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.4■■□□□ 1.5
TSPAN3O60637 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN3O60637 KRT18P24-201ENST00000344739 1156 ntBASIC24.4■■□□□ 1.5
TSPAN3O60637 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.4■■□□□ 1.5
TSPAN3O60637 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN3O60637 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.4■■□□□ 1.5
TSPAN3O60637 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.4■■□□□ 1.5
TSPAN3O60637 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
TSPAN3O60637 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
TSPAN3O60637 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
TSPAN3O60637 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC24.39■■□□□ 1.49
TSPAN3O60637 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TSPAN3O60637 FOXO3B-201ENST00000395675 1928 ntBASIC24.38■■□□□ 1.49
TSPAN3O60637 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TSPAN3O60637 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.38■■□□□ 1.49
TSPAN3O60637 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
TSPAN3O60637 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.38■■□□□ 1.49
TSPAN3O60637 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
TSPAN3O60637 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TSPAN3O60637 AC239859.2-201ENST00000444165 318 ntBASIC24.37■■□□□ 1.49
TSPAN3O60637 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TSPAN3O60637 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TSPAN3O60637 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TSPAN3O60637 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
TSPAN3O60637 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TSPAN3O60637 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TSPAN3O60637 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TSPAN3O60637 HES6-204ENST00000409182 863 ntTSL 2 BASIC24.36■■□□□ 1.49
TSPAN3O60637 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.36■■□□□ 1.49
TSPAN3O60637 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC24.36■■□□□ 1.49
TSPAN3O60637 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TSPAN3O60637 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC24.35■■□□□ 1.49
TSPAN3O60637 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
TSPAN3O60637 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.35■■□□□ 1.49
TSPAN3O60637 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC24.35■■□□□ 1.49
TSPAN3O60637 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.35■■□□□ 1.49
TSPAN3O60637 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
TSPAN3O60637 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TSPAN3O60637 DUSP8P4-201ENST00000399538 1761 ntBASIC24.34■■□□□ 1.49
TSPAN3O60637 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TSPAN3O60637 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.34■■□□□ 1.49
TSPAN3O60637 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
TSPAN3O60637 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TSPAN3O60637 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TSPAN3O60637 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TSPAN3O60637 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
TSPAN3O60637 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
TSPAN3O60637 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TSPAN3O60637 AC145676.1-201ENST00000514988 2004 ntBASIC24.32■■□□□ 1.48
TSPAN3O60637 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TSPAN3O60637 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TSPAN3O60637 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
TSPAN3O60637 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.32■■□□□ 1.48
TSPAN3O60637 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TSPAN3O60637 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.32■■□□□ 1.48
TSPAN3O60637 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TSPAN3O60637 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TSPAN3O60637 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TSPAN3O60637 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
TSPAN3O60637 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.31■■□□□ 1.48
TSPAN3O60637 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
TSPAN3O60637 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TSPAN3O60637 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TSPAN3O60637 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC24.3■■□□□ 1.48
TSPAN3O60637 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TSPAN3O60637 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
TSPAN3O60637 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TSPAN3O60637 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TSPAN3O60637 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.29■■□□□ 1.48
TSPAN3O60637 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC24.29■■□□□ 1.48
TSPAN3O60637 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
TSPAN3O60637 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TSPAN3O60637 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TSPAN3O60637 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC24.29■■□□□ 1.48
TSPAN3O60637 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
TSPAN3O60637 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
TSPAN3O60637 GUSBP5-201ENST00000418136 578 ntBASIC24.28■■□□□ 1.48
TSPAN3O60637 BX664725.1-201ENST00000438252 379 ntBASIC24.28■■□□□ 1.48
TSPAN3O60637 MIR4281-201ENST00000580852 62 ntBASIC24.28■■□□□ 1.48
TSPAN3O60637 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.28■■□□□ 1.48
TSPAN3O60637 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
TSPAN3O60637 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TSPAN3O60637 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TSPAN3O60637 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TSPAN3O60637 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TSPAN3O60637 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
TSPAN3O60637 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TSPAN3O60637 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC24.27■■□□□ 1.48
TSPAN3O60637 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TSPAN3O60637 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TSPAN3O60637 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.27■■□□□ 1.48
TSPAN3O60637 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.27■■□□□ 1.48
TSPAN3O60637 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.27■■□□□ 1.48
TSPAN3O60637 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC24.26■■□□□ 1.47
TSPAN3O60637 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TSPAN3O60637 Z92544.1-202ENST00000571933 1220 ntBASIC24.26■■□□□ 1.47
TSPAN3O60637 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms