Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSSCA1O60232 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.14■□□□□ 0.65
SSSCA1O60232 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
SSSCA1O60232 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSSCA1O60232 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSSCA1O60232 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSSCA1O60232 AC004812.2-201ENST00000611079 2094 ntBASIC19.12■□□□□ 0.65
SSSCA1O60232 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSSCA1O60232 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SSSCA1O60232 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SSSCA1O60232 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC19.12■□□□□ 0.65
SSSCA1O60232 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSSCA1O60232 DUX4L29-201ENST00000425409 679 ntBASIC19.12■□□□□ 0.65
SSSCA1O60232 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SSSCA1O60232 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSSCA1O60232 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
SSSCA1O60232 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.11■□□□□ 0.65
SSSCA1O60232 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.11■□□□□ 0.65
SSSCA1O60232 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.11■□□□□ 0.65
SSSCA1O60232 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SSSCA1O60232 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.1■□□□□ 0.65
SSSCA1O60232 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.1■□□□□ 0.65
SSSCA1O60232 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SSSCA1O60232 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
SSSCA1O60232 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSSCA1O60232 ABCB10P4-201ENST00000566803 2184 ntBASIC19.09■□□□□ 0.65
SSSCA1O60232 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSSCA1O60232 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SSSCA1O60232 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SSSCA1O60232 NRG1-221ENST00000614767 762 ntTSL 5 BASIC19.09■□□□□ 0.65
SSSCA1O60232 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.09■□□□□ 0.65
SSSCA1O60232 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSSCA1O60232 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
SSSCA1O60232 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SSSCA1O60232 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSSCA1O60232 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSSCA1O60232 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSSCA1O60232 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSSCA1O60232 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SSSCA1O60232 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSSCA1O60232 AC008813.1-201ENST00000536597 885 ntBASIC19.08■□□□□ 0.64
SSSCA1O60232 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SSSCA1O60232 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSSCA1O60232 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSSCA1O60232 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SSSCA1O60232 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSSCA1O60232 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSSCA1O60232 CHST11-202ENST00000546689 756 ntTSL 2 BASIC19.07■□□□□ 0.64
SSSCA1O60232 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
SSSCA1O60232 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSSCA1O60232 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SSSCA1O60232 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSSCA1O60232 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSSCA1O60232 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SSSCA1O60232 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SSSCA1O60232 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.07■□□□□ 0.64
SSSCA1O60232 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSSCA1O60232 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSSCA1O60232 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
SSSCA1O60232 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.06■□□□□ 0.64
SSSCA1O60232 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SSSCA1O60232 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.06■□□□□ 0.64
SSSCA1O60232 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSSCA1O60232 AL162393.1-201ENST00000437852 946 ntBASIC19.06■□□□□ 0.64
SSSCA1O60232 AC148477.6-201ENST00000623746 465 ntBASIC19.06■□□□□ 0.64
SSSCA1O60232 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSSCA1O60232 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SSSCA1O60232 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSSCA1O60232 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SSSCA1O60232 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.05■□□□□ 0.64
SSSCA1O60232 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSSCA1O60232 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SSSCA1O60232 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.05■□□□□ 0.64
SSSCA1O60232 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SSSCA1O60232 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SSSCA1O60232 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SSSCA1O60232 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms