Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHL1O00533 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CHL1O00533 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHL1O00533 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC30.68■■■□□ 2.5
CHL1O00533 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHL1O00533 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
CHL1O00533 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CHL1O00533 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
CHL1O00533 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.66■■■□□ 2.5
CHL1O00533 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHL1O00533 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CHL1O00533 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHL1O00533 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHL1O00533 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.65■■■□□ 2.5
CHL1O00533 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
CHL1O00533 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHL1O00533 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
CHL1O00533 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CHL1O00533 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHL1O00533 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CHL1O00533 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC30.64■■■□□ 2.5
CHL1O00533 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHL1O00533 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
CHL1O00533 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CHL1O00533 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
CHL1O00533 THA1P-201ENST00000590384 1145 ntBASIC30.63■■■□□ 2.49
CHL1O00533 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHL1O00533 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CHL1O00533 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.62■■■□□ 2.49
CHL1O00533 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CHL1O00533 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.62■■■□□ 2.49
CHL1O00533 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CHL1O00533 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
CHL1O00533 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
CHL1O00533 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHL1O00533 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHL1O00533 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC30.61■■■□□ 2.49
CHL1O00533 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
CHL1O00533 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHL1O00533 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CHL1O00533 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC30.61■■■□□ 2.49
CHL1O00533 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.6■■■□□ 2.49
CHL1O00533 SSSCA1-AS1-201ENST00000567594 614 ntBASIC30.6■■■□□ 2.49
CHL1O00533 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.6■■■□□ 2.49
CHL1O00533 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
CHL1O00533 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.6■■■□□ 2.49
CHL1O00533 SLC6A10P-202ENST00000431994 2058 ntBASIC30.59■■■□□ 2.49
CHL1O00533 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
CHL1O00533 AC011551.1-201ENST00000614101 683 ntBASIC30.59■■■□□ 2.49
CHL1O00533 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CHL1O00533 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.57■■■□□ 2.48
CHL1O00533 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC30.57■■■□□ 2.48
CHL1O00533 RNF146-205ENST00000477776 762 ntTSL 3 BASIC30.57■■■□□ 2.48
CHL1O00533 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CHL1O00533 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.57■■■□□ 2.48
CHL1O00533 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHL1O00533 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
CHL1O00533 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.56■■■□□ 2.48
CHL1O00533 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.56■■■□□ 2.48
CHL1O00533 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHL1O00533 HES6-204ENST00000409182 863 ntTSL 2 BASIC30.55■■■□□ 2.48
CHL1O00533 OR2A1-AS1-204ENST00000470435 602 ntBASIC30.55■■■□□ 2.48
CHL1O00533 MIR4281-201ENST00000580852 62 ntBASIC30.55■■■□□ 2.48
CHL1O00533 AC137630.3-201ENST00000607245 391 ntBASIC30.55■■■□□ 2.48
CHL1O00533 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHL1O00533 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHL1O00533 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.54■■■□□ 2.48
CHL1O00533 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CHL1O00533 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHL1O00533 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.54■■■□□ 2.48
CHL1O00533 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.54■■■□□ 2.48
CHL1O00533 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC30.54■■■□□ 2.48
CHL1O00533 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHL1O00533 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.53■■■□□ 2.48
CHL1O00533 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.53■■■□□ 2.48
CHL1O00533 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.53■■■□□ 2.48
CHL1O00533 Z92544.1-202ENST00000571933 1220 ntBASIC30.53■■■□□ 2.48
CHL1O00533 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.53■■■□□ 2.48
CHL1O00533 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.53■■■□□ 2.48
CHL1O00533 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
CHL1O00533 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC30.52■■■□□ 2.48
CHL1O00533 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHL1O00533 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC30.52■■■□□ 2.48
CHL1O00533 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.52■■■□□ 2.48
CHL1O00533 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHL1O00533 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
CHL1O00533 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CHL1O00533 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CHL1O00533 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
CHL1O00533 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
CHL1O00533 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHL1O00533 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
CHL1O00533 AC090877.2-201ENST00000558441 1738 ntBASIC30.5■■■□□ 2.47
CHL1O00533 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHL1O00533 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHL1O00533 AC239859.2-201ENST00000444165 318 ntBASIC30.5■■■□□ 2.47
CHL1O00533 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHL1O00533 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.49■■■□□ 2.47
CHL1O00533 GUSBP5-201ENST00000418136 578 ntBASIC30.49■■■□□ 2.47
CHL1O00533 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms