Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
PIK3C2AO00443 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.29■■■□□ 2.76
PIK3C2AO00443 AC010997.5-201ENST00000609182 354 ntBASIC32.29■■■□□ 2.76
PIK3C2AO00443 AC110285.6-201ENST00000617652 491 ntBASIC32.29■■■□□ 2.76
PIK3C2AO00443 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
PIK3C2AO00443 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.29■■■□□ 2.76
PIK3C2AO00443 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
PIK3C2AO00443 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.28■■■□□ 2.76
PIK3C2AO00443 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC32.28■■■□□ 2.76
PIK3C2AO00443 MIR3621-201ENST00000580529 85 ntBASIC32.28■■■□□ 2.76
PIK3C2AO00443 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
PIK3C2AO00443 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
PIK3C2AO00443 AL136116.3-201ENST00000402907 1138 ntBASIC32.27■■■□□ 2.76
PIK3C2AO00443 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PIK3C2AO00443 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PIK3C2AO00443 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PIK3C2AO00443 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
PIK3C2AO00443 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
PIK3C2AO00443 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
PIK3C2AO00443 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PIK3C2AO00443 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
PIK3C2AO00443 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC32.25■■■□□ 2.75
PIK3C2AO00443 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PIK3C2AO00443 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PIK3C2AO00443 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
PIK3C2AO00443 MIR935-201ENST00000401179 91 ntBASIC32.24■■■□□ 2.75
PIK3C2AO00443 EXOG-217ENST00000630638 197 ntTSL 5 BASIC32.24■■■□□ 2.75
PIK3C2AO00443 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PIK3C2AO00443 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.24■■■□□ 2.75
PIK3C2AO00443 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PIK3C2AO00443 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC32.24■■■□□ 2.75
PIK3C2AO00443 RASSF1-AS1-201ENST00000629828 790 ntBASIC32.24■■■□□ 2.75
PIK3C2AO00443 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC32.24■■■□□ 2.75
PIK3C2AO00443 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
PIK3C2AO00443 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.23■■■□□ 2.75
PIK3C2AO00443 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PIK3C2AO00443 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC32.22■■■□□ 2.75
PIK3C2AO00443 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.22■■■□□ 2.75
PIK3C2AO00443 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC32.22■■■□□ 2.75
PIK3C2AO00443 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC32.22■■■□□ 2.75
PIK3C2AO00443 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
PIK3C2AO00443 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC32.22■■■□□ 2.75
PIK3C2AO00443 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC32.22■■■□□ 2.75
PIK3C2AO00443 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC32.21■■■□□ 2.75
PIK3C2AO00443 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
PIK3C2AO00443 AL139246.5-201ENST00000606645 996 ntBASIC32.21■■■□□ 2.75
PIK3C2AO00443 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PIK3C2AO00443 TK2-202ENST00000417693 1046 ntTSL 2 BASIC32.21■■■□□ 2.75
PIK3C2AO00443 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC32.21■■■□□ 2.75
PIK3C2AO00443 RALB-208ENST00000631312 311 ntTSL 5 BASIC32.21■■■□□ 2.75
PIK3C2AO00443 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
PIK3C2AO00443 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC32.2■■■□□ 2.75
PIK3C2AO00443 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PIK3C2AO00443 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PIK3C2AO00443 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PIK3C2AO00443 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
PIK3C2AO00443 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
PIK3C2AO00443 CD72-202ENST00000378430 585 ntTSL 3 BASIC32.18■■■□□ 2.74
PIK3C2AO00443 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PIK3C2AO00443 SNX5-217ENST00000606557 1087 ntBASIC32.18■■■□□ 2.74
PIK3C2AO00443 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PIK3C2AO00443 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
PIK3C2AO00443 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PIK3C2AO00443 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
PIK3C2AO00443 NALT1-201ENST00000429224 738 ntTSL 5 BASIC32.17■■■□□ 2.74
PIK3C2AO00443 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC32.17■■■□□ 2.74
PIK3C2AO00443 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC32.17■■■□□ 2.74
PIK3C2AO00443 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PIK3C2AO00443 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
PIK3C2AO00443 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
PIK3C2AO00443 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
PIK3C2AO00443 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC32.15■■■□□ 2.74
PIK3C2AO00443 AC096887.2-201ENST00000623443 1957 ntBASIC32.15■■■□□ 2.74
PIK3C2AO00443 FOXO3B-201ENST00000395675 1928 ntBASIC32.15■■■□□ 2.74
PIK3C2AO00443 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC32.15■■■□□ 2.74
PIK3C2AO00443 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC32.15■■■□□ 2.74
PIK3C2AO00443 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC32.15■■■□□ 2.74
PIK3C2AO00443 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC32.15■■■□□ 2.74
PIK3C2AO00443 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
PIK3C2AO00443 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PIK3C2AO00443 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PIK3C2AO00443 SSSCA1-AS1-201ENST00000567594 614 ntBASIC32.14■■■□□ 2.74
PIK3C2AO00443 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC32.14■■■□□ 2.74
PIK3C2AO00443 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PIK3C2AO00443 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC32.13■■■□□ 2.73
PIK3C2AO00443 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PIK3C2AO00443 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC32.13■■■□□ 2.73
PIK3C2AO00443 CLTA-210ENST00000540080 989 ntTSL 2 BASIC32.13■■■□□ 2.73
PIK3C2AO00443 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
PIK3C2AO00443 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
PIK3C2AO00443 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PIK3C2AO00443 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.12■■■□□ 2.73
PIK3C2AO00443 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PIK3C2AO00443 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
PIK3C2AO00443 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC32.11■■■□□ 2.73
PIK3C2AO00443 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC32.11■■■□□ 2.73
PIK3C2AO00443 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC32.11■■■□□ 2.73
PIK3C2AO00443 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC32.11■■■□□ 2.73
PIK3C2AO00443 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.1■■■□□ 2.73
PIK3C2AO00443 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC32.1■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms