Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.7■■□□□ 1.06
CPSF4LA6NMK7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.7■■□□□ 1.06
CPSF4LA6NMK7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF4LA6NMK7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF4LA6NMK7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CPSF4LA6NMK7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 GPX1-201ENST00000419349 1106 ntBASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 MIR4449-201ENST00000578365 66 ntBASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CPSF4LA6NMK7 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CPSF4LA6NMK7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CPSF4LA6NMK7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CPSF4LA6NMK7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CPSF4LA6NMK7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CPSF4LA6NMK7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CPSF4LA6NMK7 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF4LA6NMK7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.64■■□□□ 1.05
CPSF4LA6NMK7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.64■■□□□ 1.05
CPSF4LA6NMK7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF4LA6NMK7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF4LA6NMK7 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CPSF4LA6NMK7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF4LA6NMK7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF4LA6NMK7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.63■■□□□ 1.05
CPSF4LA6NMK7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF4LA6NMK7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CPSF4LA6NMK7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.63■■□□□ 1.05
CPSF4LA6NMK7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CPSF4LA6NMK7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 RAP2CP1-202ENST00000605179 643 ntBASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CPSF4LA6NMK7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF4LA6NMK7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CPSF4LA6NMK7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CPSF4LA6NMK7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 AC026202.3-201ENST00000600805 1127 ntBASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CPSF4LA6NMK7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CPSF4LA6NMK7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF4LA6NMK7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF4LA6NMK7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF4LA6NMK7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CPSF4LA6NMK7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF4LA6NMK7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CPSF4LA6NMK7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms