Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHISA3A0PJX4 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SHISA3A0PJX4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHISA3A0PJX4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA3A0PJX4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA3A0PJX4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA3A0PJX4 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.64■□□□□ 0.89
SHISA3A0PJX4 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.64■□□□□ 0.89
SHISA3A0PJX4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHISA3A0PJX4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 AC044849.2-201ENST00000606596 710 ntBASIC20.63■□□□□ 0.89
SHISA3A0PJX4 AC148477.6-201ENST00000623746 465 ntBASIC20.63■□□□□ 0.89
SHISA3A0PJX4 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHISA3A0PJX4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.62■□□□□ 0.89
SHISA3A0PJX4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SHISA3A0PJX4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SHISA3A0PJX4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.62■□□□□ 0.89
SHISA3A0PJX4 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SHISA3A0PJX4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.62■□□□□ 0.89
SHISA3A0PJX4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SHISA3A0PJX4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 AL162393.1-201ENST00000437852 946 ntBASIC20.61■□□□□ 0.89
SHISA3A0PJX4 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHISA3A0PJX4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHISA3A0PJX4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 DUX4L29-201ENST00000425409 679 ntBASIC20.59■□□□□ 0.89
SHISA3A0PJX4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SHISA3A0PJX4 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.58■□□□□ 0.89
SHISA3A0PJX4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SHISA3A0PJX4 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.58■□□□□ 0.89
SHISA3A0PJX4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SHISA3A0PJX4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA3A0PJX4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA3A0PJX4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
SHISA3A0PJX4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.57■□□□□ 0.88
SHISA3A0PJX4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SHISA3A0PJX4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SHISA3A0PJX4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SHISA3A0PJX4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.55■□□□□ 0.88
SHISA3A0PJX4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA3A0PJX4 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SHISA3A0PJX4 AC008813.1-201ENST00000536597 885 ntBASIC20.55■□□□□ 0.88
SHISA3A0PJX4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 MIR6089-201ENST00000616698 64 ntBASIC20.54■□□□□ 0.88
SHISA3A0PJX4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SHISA3A0PJX4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms