Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV9S1A1TA0A576 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV9S1A1TA0A576 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV9S1A1TA0A576 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TCRBV9S1A1TA0A576 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV9S1A1TA0A576 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TCRBV9S1A1TA0A576 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV9S1A1TA0A576 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV9S1A1TA0A576 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV9S1A1TA0A576 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TCRBV9S1A1TA0A576 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV9S1A1TA0A576 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.79■■□□□ 1.4
TCRBV9S1A1TA0A576 AC141586.4-201ENST00000624558 1573 ntBASIC23.79■■□□□ 1.4
TCRBV9S1A1TA0A576 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.79■■□□□ 1.4
TCRBV9S1A1TA0A576 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TCRBV9S1A1TA0A576 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
TCRBV9S1A1TA0A576 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TCRBV9S1A1TA0A576 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.77■■□□□ 1.4
TCRBV9S1A1TA0A576 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
TCRBV9S1A1TA0A576 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 MIR6089-201ENST00000616698 64 ntBASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.76■■□□□ 1.39
TCRBV9S1A1TA0A576 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.75■■□□□ 1.39
TCRBV9S1A1TA0A576 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.75■■□□□ 1.39
TCRBV9S1A1TA0A576 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV9S1A1TA0A576 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
TCRBV9S1A1TA0A576 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV9S1A1TA0A576 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV9S1A1TA0A576 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV9S1A1TA0A576 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.74■■□□□ 1.39
TCRBV9S1A1TA0A576 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV9S1A1TA0A576 REST-210ENST00000638187 1334 ntTSL 5 BASIC23.74■■□□□ 1.39
TCRBV9S1A1TA0A576 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV9S1A1TA0A576 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV9S1A1TA0A576 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV9S1A1TA0A576 AC004812.2-201ENST00000611079 2094 ntBASIC23.73■■□□□ 1.39
TCRBV9S1A1TA0A576 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV9S1A1TA0A576 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.73■■□□□ 1.39
TCRBV9S1A1TA0A576 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.73■■□□□ 1.39
TCRBV9S1A1TA0A576 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.73■■□□□ 1.39
TCRBV9S1A1TA0A576 RP9P-202ENST00000450133 1212 ntBASIC23.72■■□□□ 1.39
TCRBV9S1A1TA0A576 ECEL1P2-201ENST00000461596 1295 ntBASIC23.72■■□□□ 1.39
TCRBV9S1A1TA0A576 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.72■■□□□ 1.39
TCRBV9S1A1TA0A576 MIR7108-201ENST00000614319 87 ntBASIC23.72■■□□□ 1.39
TCRBV9S1A1TA0A576 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV9S1A1TA0A576 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.72■■□□□ 1.39
TCRBV9S1A1TA0A576 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TCRBV9S1A1TA0A576 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV9S1A1TA0A576 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.71■■□□□ 1.39
TCRBV9S1A1TA0A576 MIR639-201ENST00000384974 98 ntBASIC23.71■■□□□ 1.39
TCRBV9S1A1TA0A576 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC23.71■■□□□ 1.39
TCRBV9S1A1TA0A576 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV9S1A1TA0A576 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV9S1A1TA0A576 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV9S1A1TA0A576 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV9S1A1TA0A576 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV9S1A1TA0A576 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.7■■□□□ 1.38
TCRBV9S1A1TA0A576 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV9S1A1TA0A576 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.7■■□□□ 1.38
TCRBV9S1A1TA0A576 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV9S1A1TA0A576 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 AC093536.1-201ENST00000569153 554 ntBASIC23.68■■□□□ 1.38
TCRBV9S1A1TA0A576 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms