Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF103-CHMP3A0A140T963 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF103-CHMP3A0A140T963 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF103-CHMP3A0A140T963 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF103-CHMP3A0A140T963 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF103-CHMP3A0A140T963 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF103-CHMP3A0A140T963 AC025884.2-201ENST00000553429 711 ntBASIC22.55■■□□□ 1.2
RNF103-CHMP3A0A140T963 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF103-CHMP3A0A140T963 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF103-CHMP3A0A140T963 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF103-CHMP3A0A140T963 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF103-CHMP3A0A140T963 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.54■■□□□ 1.2
RNF103-CHMP3A0A140T963 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF103-CHMP3A0A140T963 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF103-CHMP3A0A140T963 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF103-CHMP3A0A140T963 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RNF103-CHMP3A0A140T963 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF103-CHMP3A0A140T963 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RNF103-CHMP3A0A140T963 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.52■■□□□ 1.2
RNF103-CHMP3A0A140T963 AC092296.2-201ENST00000589470 999 ntBASIC22.52■■□□□ 1.2
RNF103-CHMP3A0A140T963 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RNF103-CHMP3A0A140T963 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.52■■□□□ 1.2
RNF103-CHMP3A0A140T963 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RNF103-CHMP3A0A140T963 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 MIR3960-201ENST00000583311 91 ntBASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RNF103-CHMP3A0A140T963 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
RNF103-CHMP3A0A140T963 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RNF103-CHMP3A0A140T963 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.5■■□□□ 1.19
RNF103-CHMP3A0A140T963 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF103-CHMP3A0A140T963 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF103-CHMP3A0A140T963 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
RNF103-CHMP3A0A140T963 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 SMPD5-203ENST00000639008 1464 ntBASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
RNF103-CHMP3A0A140T963 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RNF103-CHMP3A0A140T963 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 LINC01124-201ENST00000409786 2117 ntBASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 AC022413.1-201ENST00000624602 984 ntBASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RNF103-CHMP3A0A140T963 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RNF103-CHMP3A0A140T963 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF103-CHMP3A0A140T963 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF103-CHMP3A0A140T963 AC097639.1-201ENST00000565519 1891 ntBASIC22.46■■□□□ 1.19
RNF103-CHMP3A0A140T963 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.46■■□□□ 1.19
RNF103-CHMP3A0A140T963 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF103-CHMP3A0A140T963 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
RNF103-CHMP3A0A140T963 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22.45■■□□□ 1.19
RNF103-CHMP3A0A140T963 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF103-CHMP3A0A140T963 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF103-CHMP3A0A140T963 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF103-CHMP3A0A140T963 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF103-CHMP3A0A140T963 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RNF103-CHMP3A0A140T963 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF103-CHMP3A0A140T963 ECEL1P2-201ENST00000461596 1295 ntBASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms