Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 AC079834.2-201ENST00000609776 1949 ntBASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRBV27A0A0K0K1C4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 HLA-V-202ENST00000446817 847 ntBASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 MED25-210ENST00000612854 801 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 MIR6089-201ENST00000616698 64 ntBASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRBV27A0A0K0K1C4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRBV27A0A0K0K1C4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV27A0A0K0K1C4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV27A0A0K0K1C4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC16.65■□□□□ 0.26
TRBV27A0A0K0K1C4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV27A0A0K0K1C4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRBV27A0A0K0K1C4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRBV27A0A0K0K1C4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRBV27A0A0K0K1C4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 HES6-205ENST00000409356 528 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 DUX4L11-201ENST00000611504 1267 ntBASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 DUX4L12-201ENST00000614593 1267 ntBASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 DUX4L14-201ENST00000621227 1267 ntBASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRBV27A0A0K0K1C4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 SHD-204ENST00000599689 1729 ntTSL 5 BASIC16.62■□□□□ 0.25
TRBV27A0A0K0K1C4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRBV27A0A0K0K1C4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV27A0A0K0K1C4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC16.6■□□□□ 0.25
TRBV27A0A0K0K1C4 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV27A0A0K0K1C4 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC16.6■□□□□ 0.25
TRBV27A0A0K0K1C4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRBV27A0A0K0K1C4 ABCB10P4-201ENST00000566803 2184 ntBASIC16.6■□□□□ 0.25
TRBV27A0A0K0K1C4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRBV27A0A0K0K1C4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC16.59■□□□□ 0.25
TRBV27A0A0K0K1C4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms