Protein–RNA interactions for Protein: Q9Y2Q0

ATP8A1, Phospholipid-transporting ATPase IA, humanhuman

Predictions only

Length 1,164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8A1Q9Y2Q0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 AL353732.1-201ENST00000569618 1459 ntBASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 AL512652.2-201ENST00000625156 1716 ntBASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 IGLL3P-201ENST00000412472 434 ntBASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 FAM185BP-201ENST00000443595 716 ntBASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 AC005412.3-201ENST00000580309 715 ntBASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 AL031731.1-201ENST00000642131 2094 ntBASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 REXO1L8P-201ENST00000604378 1897 ntBASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP8A1Q9Y2Q0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 AC013268.4-201ENST00000637413 2228 ntBASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 KRT18P2-201ENST00000447938 1258 ntBASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 ACTL9-202ENST00000612068 1252 ntBASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 AL136379.1-201ENST00000623471 2642 ntBASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 AC131009.4-201ENST00000624048 1740 ntBASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP8A1Q9Y2Q0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP8A1Q9Y2Q0 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms