Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 MTDHP4-201ENST00000600287 670 ntBASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 AC091076.1-201ENST00000610741 619 ntBASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 AC020765.3-201ENST00000613051 740 ntBASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CMSS1Q9BQ75 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 PCDHA3-202ENST00000532566 4594 ntBASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.96□□□□□ -0.18
CMSS1Q9BQ75 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SLC22A20-204ENST00000530038 1673 ntBASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SLC25A6P2-201ENST00000497974 877 ntBASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 AC010654.1-201ENST00000615722 808 ntBASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 AL355877.3-201ENST00000622820 899 ntBASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 AP005117.1-202ENST00000581724 1908 ntBASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 PRAL-201ENST00000624952 3286 ntBASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CMSS1Q9BQ75 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 CDC14C-201ENST00000428251 1719 ntBASIC13.94□□□□□ -0.18
CMSS1Q9BQ75 FAM210CP-201ENST00000445714 574 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms