Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ARID3AQ99856 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ARID3AQ99856 AC093525.9-201ENST00000624961 1746 ntBASIC18.6■□□□□ 0.57
ARID3AQ99856 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ARID3AQ99856 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ARID3AQ99856 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.6■□□□□ 0.57
ARID3AQ99856 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.59■□□□□ 0.57
ARID3AQ99856 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 RN7SL510P-201ENST00000581311 263 ntBASIC18.59■□□□□ 0.57
ARID3AQ99856 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.59■□□□□ 0.57
ARID3AQ99856 LINC01711-201ENST00000598340 967 ntBASIC18.59■□□□□ 0.57
ARID3AQ99856 TP73-AS1-207ENST00000624167 988 ntBASIC18.59■□□□□ 0.57
ARID3AQ99856 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ARID3AQ99856 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 AC013268.4-201ENST00000637413 2228 ntBASIC18.59■□□□□ 0.57
ARID3AQ99856 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.59■□□□□ 0.57
ARID3AQ99856 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ARID3AQ99856 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ARID3AQ99856 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
ARID3AQ99856 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.58■□□□□ 0.57
ARID3AQ99856 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.58■□□□□ 0.57
ARID3AQ99856 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.58■□□□□ 0.57
ARID3AQ99856 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.58■□□□□ 0.57
ARID3AQ99856 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ARID3AQ99856 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 AC026396.1-201ENST00000419388 421 ntBASIC18.58■□□□□ 0.56
ARID3AQ99856 SIGLEC30P-201ENST00000455569 941 ntBASIC18.58■□□□□ 0.56
ARID3AQ99856 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ARID3AQ99856 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ARID3AQ99856 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.58■□□□□ 0.56
ARID3AQ99856 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.58■□□□□ 0.56
ARID3AQ99856 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.58■□□□□ 0.56
ARID3AQ99856 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.58■□□□□ 0.56
ARID3AQ99856 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.58■□□□□ 0.56
ARID3AQ99856 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.58■□□□□ 0.56
ARID3AQ99856 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ARID3AQ99856 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ARID3AQ99856 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.58■□□□□ 0.56
ARID3AQ99856 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.58■□□□□ 0.56
ARID3AQ99856 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ARID3AQ99856 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
ARID3AQ99856 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.57■□□□□ 0.56
ARID3AQ99856 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.57■□□□□ 0.56
ARID3AQ99856 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.57■□□□□ 0.56
ARID3AQ99856 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.57■□□□□ 0.56
ARID3AQ99856 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ARID3AQ99856 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.57■□□□□ 0.56
ARID3AQ99856 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms