Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CPNE1Q99829 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE1Q99829 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.23■□□□□ 0.19
CPNE1Q99829 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.23■□□□□ 0.19
CPNE1Q99829 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE1Q99829 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CPNE1Q99829 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 AC013268.4-201ENST00000637413 2228 ntBASIC16.23■□□□□ 0.19
CPNE1Q99829 AL589702.1-201ENST00000641229 1509 ntBASIC16.23■□□□□ 0.19
CPNE1Q99829 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.23■□□□□ 0.19
CPNE1Q99829 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CPNE1Q99829 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.23■□□□□ 0.19
CPNE1Q99829 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CPNE1Q99829 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CPNE1Q99829 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CPNE1Q99829 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CPNE1Q99829 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 AC079776.4-201ENST00000511039 504 ntBASIC16.22■□□□□ 0.19
CPNE1Q99829 RNA5SP419-201ENST00000515908 135 ntBASIC16.22■□□□□ 0.19
CPNE1Q99829 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 AC002347.1-201ENST00000569543 541 ntBASIC16.22■□□□□ 0.19
CPNE1Q99829 MIR4321-201ENST00000592276 80 ntBASIC16.22■□□□□ 0.19
CPNE1Q99829 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CPNE1Q99829 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.22■□□□□ 0.19
CPNE1Q99829 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CPNE1Q99829 PPT1-215ENST00000641471 2368 ntBASIC16.22■□□□□ 0.19
CPNE1Q99829 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CPNE1Q99829 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.22■□□□□ 0.19
CPNE1Q99829 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE1Q99829 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE1Q99829 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE1Q99829 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE1Q99829 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.21■□□□□ 0.19
CPNE1Q99829 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 AC020658.6-201ENST00000623564 1870 ntBASIC16.21■□□□□ 0.19
CPNE1Q99829 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 AC144831.1-201ENST00000573312 2656 ntBASIC16.21■□□□□ 0.19
CPNE1Q99829 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.21■□□□□ 0.19
CPNE1Q99829 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CPNE1Q99829 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.21■□□□□ 0.19
CPNE1Q99829 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms