Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RAB3IPQ96QF0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 FAM220CP-201ENST00000395253 831 ntBASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 AC004817.3-201ENST00000602957 2129 ntBASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RAB3IPQ96QF0 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.89■□□□□ 0.14
RAB3IPQ96QF0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
RAB3IPQ96QF0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 ACTG1P4-201ENST00000425123 1122 ntBASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 FITM1-202ENST00000559294 800 ntBASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 AP000525.1-201ENST00000608286 694 ntBASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
RAB3IPQ96QF0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 AC091951.1-201ENST00000512854 2465 ntBASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
RAB3IPQ96QF0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms