Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHMP6Q96FZ7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 TOP3BP1-201ENST00000420768 1380 ntBASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 RN7SL606P-201ENST00000472779 293 ntBASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 TERC-201ENST00000602385 541 ntBASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 AL353801.3-201ENST00000609898 542 ntBASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHMP6Q96FZ7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 TSSC2-201ENST00000450217 709 ntBASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHMP6Q96FZ7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CHMP6Q96FZ7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.39■□□□□ 0.21
CHMP6Q96FZ7 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms