Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RAB42Q8N4Z0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 TSEN15P1-201ENST00000423257 515 ntBASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 ALG1L8P-201ENST00000533887 760 ntBASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 RARRES2P9-201ENST00000565168 469 ntBASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAB42Q8N4Z0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 AP3S2-216ENST00000617003 1561 ntBASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 AC025678.2-201ENST00000562061 970 ntBASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 AC004449.1-201ENST00000564240 433 ntBASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.79■□□□□ 0.12
RAB42Q8N4Z0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 CYP2T1P-202ENST00000641596 2535 ntBASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAB42Q8N4Z0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms