Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NPAS4Q8IUM7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 TOMM22P5-201ENST00000416399 439 ntBASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 TDH-203ENST00000531764 1110 ntBASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 AL359711.2-201ENST00000563105 872 ntBASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NPAS4Q8IUM7 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
NPAS4Q8IUM7 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.21■□□□□ 0.34
NPAS4Q8IUM7 PDIA3P1-201ENST00000471856 1510 ntBASIC17.21■□□□□ 0.34
NPAS4Q8IUM7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
NPAS4Q8IUM7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NPAS4Q8IUM7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 AC009053.2-201ENST00000563701 2365 ntBASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 RPL13AP25-201ENST00000484130 612 ntBASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 ENPP7P5-201ENST00000541031 1031 ntBASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 AL022328.1-201ENST00000610050 478 ntBASIC17.2■□□□□ 0.34
NPAS4Q8IUM7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms