Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
KCNA1Q09470 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNA1Q09470 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
KCNA1Q09470 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.81■□□□□ 0.44
KCNA1Q09470 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNA1Q09470 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.81■□□□□ 0.44
KCNA1Q09470 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.81■□□□□ 0.44
KCNA1Q09470 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 AC112504.1-201ENST00000623415 1841 ntBASIC17.81■□□□□ 0.44
KCNA1Q09470 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNA1Q09470 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.81■□□□□ 0.44
KCNA1Q09470 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
KCNA1Q09470 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
KCNA1Q09470 AC069224.1-201ENST00000566372 1715 ntBASIC17.81■□□□□ 0.44
KCNA1Q09470 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.81■□□□□ 0.44
KCNA1Q09470 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNA1Q09470 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.8■□□□□ 0.44
KCNA1Q09470 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNA1Q09470 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
KCNA1Q09470 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.8■□□□□ 0.44
KCNA1Q09470 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.8■□□□□ 0.44
KCNA1Q09470 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.8■□□□□ 0.44
KCNA1Q09470 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.8■□□□□ 0.44
KCNA1Q09470 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
KCNA1Q09470 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.8■□□□□ 0.44
KCNA1Q09470 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.8■□□□□ 0.44
KCNA1Q09470 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNA1Q09470 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
KCNA1Q09470 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNA1Q09470 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.8■□□□□ 0.44
KCNA1Q09470 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNA1Q09470 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
KCNA1Q09470 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNA1Q09470 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
KCNA1Q09470 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.8■□□□□ 0.44
KCNA1Q09470 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
KCNA1Q09470 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 AL136982.4-201ENST00000437689 1740 ntBASIC17.79■□□□□ 0.44
KCNA1Q09470 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.79■□□□□ 0.44
KCNA1Q09470 HLA-J-203ENST00000494367 1087 ntBASIC17.79■□□□□ 0.44
KCNA1Q09470 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.79■□□□□ 0.44
KCNA1Q09470 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.79■□□□□ 0.44
KCNA1Q09470 BANF1P1-201ENST00000553684 263 ntBASIC17.79■□□□□ 0.44
KCNA1Q09470 LINC00628-201ENST00000628516 1289 ntBASIC17.79■□□□□ 0.44
KCNA1Q09470 AC007950.2-201ENST00000615045 2347 ntBASIC17.79■□□□□ 0.44
KCNA1Q09470 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
KCNA1Q09470 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.79■□□□□ 0.44
KCNA1Q09470 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.79■□□□□ 0.44
KCNA1Q09470 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.79■□□□□ 0.44
KCNA1Q09470 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 AC134407.2-201ENST00000625089 1978 ntBASIC17.79■□□□□ 0.44
KCNA1Q09470 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
KCNA1Q09470 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms