Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PHC1P78364 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.52■□□□□ 0.07
PHC1P78364 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PHC1P78364 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PHC1P78364 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.52■□□□□ 0.07
PHC1P78364 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.51■□□□□ 0.07
PHC1P78364 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 AC026396.1-201ENST00000419388 421 ntBASIC15.51■□□□□ 0.07
PHC1P78364 AC098831.1-202ENST00000438821 336 ntBASIC15.51■□□□□ 0.07
PHC1P78364 VN2R19P-201ENST00000442399 1052 ntBASIC15.51■□□□□ 0.07
PHC1P78364 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.51■□□□□ 0.07
PHC1P78364 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.51■□□□□ 0.07
PHC1P78364 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.51■□□□□ 0.07
PHC1P78364 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.51■□□□□ 0.07
PHC1P78364 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.51■□□□□ 0.07
PHC1P78364 MIR4751-201ENST00000578027 74 ntBASIC15.51■□□□□ 0.07
PHC1P78364 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 AL645728.2-201ENST00000641974 660 ntBASIC15.51■□□□□ 0.07
PHC1P78364 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
PHC1P78364 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
PHC1P78364 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.51■□□□□ 0.07
PHC1P78364 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PHC1P78364 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 AP003680.1-201ENST00000598970 3660 ntBASIC15.5■□□□□ 0.07
PHC1P78364 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.5■□□□□ 0.07
PHC1P78364 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PHC1P78364 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PHC1P78364 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.5■□□□□ 0.07
PHC1P78364 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 AL031284.1-201ENST00000419297 478 ntBASIC15.5■□□□□ 0.07
PHC1P78364 AC009947.1-201ENST00000444350 727 ntBASIC15.5■□□□□ 0.07
PHC1P78364 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 UNC93B6-202ENST00000528242 690 ntBASIC15.5■□□□□ 0.07
PHC1P78364 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.5■□□□□ 0.07
PHC1P78364 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.5■□□□□ 0.07
PHC1P78364 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 AC116407.3-201ENST00000623905 1129 ntBASIC15.5■□□□□ 0.07
PHC1P78364 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.5■□□□□ 0.07
PHC1P78364 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PHC1P78364 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PHC1P78364 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms