Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AF228730.8-201ENST00000642140 221 ntBASIC14.19□□□□□ -0.14
HIST1H3AP68431 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H3AP68431 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H3AP68431 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 AC063926.3-201ENST00000624734 5658 ntBASIC14.18□□□□□ -0.14
HIST1H3AP68431 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 AC011477.6-201ENST00000604980 1927 ntBASIC14.18□□□□□ -0.14
HIST1H3AP68431 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 SPCS2P4-201ENST00000436160 681 ntBASIC14.18□□□□□ -0.14
HIST1H3AP68431 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 KRT8P48-201ENST00000515599 1220 ntBASIC14.18□□□□□ -0.14
HIST1H3AP68431 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 KRT8P23-201ENST00000560090 1207 ntBASIC14.18□□□□□ -0.14
HIST1H3AP68431 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HIST1H3AP68431 AP001282.1-201ENST00000531301 1499 ntBASIC14.18□□□□□ -0.14
HIST1H3AP68431 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
HIST1H3AP68431 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HIST1H3AP68431 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HIST1H3AP68431 FAM220BP-201ENST00000377689 816 ntBASIC14.17□□□□□ -0.14
HIST1H3AP68431 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms