Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
PRIM2P49643 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
PRIM2P49643 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
PRIM2P49643 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PRIM2P49643 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
PRIM2P49643 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.52■□□□□ 0.08
PRIM2P49643 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.52■□□□□ 0.08
PRIM2P49643 AC010491.1-201ENST00000563101 2797 ntBASIC15.52■□□□□ 0.08
PRIM2P49643 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 AC026396.1-201ENST00000419388 421 ntBASIC15.52■□□□□ 0.08
PRIM2P49643 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.52■□□□□ 0.08
PRIM2P49643 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.52■□□□□ 0.08
PRIM2P49643 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.52■□□□□ 0.08
PRIM2P49643 AL031432.2-201ENST00000566714 459 ntBASIC15.52■□□□□ 0.08
PRIM2P49643 AL928711.1-201ENST00000570165 459 ntBASIC15.52■□□□□ 0.08
PRIM2P49643 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
PRIM2P49643 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
PRIM2P49643 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
PRIM2P49643 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.52■□□□□ 0.07
PRIM2P49643 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.52■□□□□ 0.07
PRIM2P49643 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.52■□□□□ 0.07
PRIM2P49643 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
PRIM2P49643 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.52■□□□□ 0.07
PRIM2P49643 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
PRIM2P49643 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.51■□□□□ 0.07
PRIM2P49643 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.51■□□□□ 0.07
PRIM2P49643 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.51■□□□□ 0.07
PRIM2P49643 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
PRIM2P49643 Z83851.2-201ENST00000609564 659 ntBASIC15.51■□□□□ 0.07
PRIM2P49643 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.51■□□□□ 0.07
PRIM2P49643 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.51■□□□□ 0.07
PRIM2P49643 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PRIM2P49643 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.51■□□□□ 0.07
PRIM2P49643 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PRIM2P49643 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.51■□□□□ 0.07
PRIM2P49643 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.51■□□□□ 0.07
PRIM2P49643 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
PRIM2P49643 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRIM2P49643 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRIM2P49643 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRIM2P49643 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.5■□□□□ 0.07
PRIM2P49643 AL136379.1-201ENST00000623471 2642 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms