Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC9A3P48764 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC9A3P48764 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC9A3P48764 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
SLC9A3P48764 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SLC9A3P48764 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
SLC9A3P48764 KRT18P56-201ENST00000507275 550 ntBASIC14.96□□□□□ -0.01
SLC9A3P48764 UNC93B7-201ENST00000509439 705 ntBASIC14.96□□□□□ -0.01
SLC9A3P48764 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC9A3P48764 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC9A3P48764 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC9A3P48764 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.96□□□□□ -0.01
SLC9A3P48764 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.96□□□□□ -0.01
SLC9A3P48764 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.96□□□□□ -0.01
SLC9A3P48764 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SLC9A3P48764 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC9A3P48764 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.96□□□□□ -0.01
SLC9A3P48764 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC9A3P48764 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SLC9A3P48764 AC006058.4-201ENST00000624016 1670 ntBASIC14.96□□□□□ -0.01
SLC9A3P48764 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
SLC9A3P48764 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC9A3P48764 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
SLC9A3P48764 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SLC9A3P48764 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC9A3P48764 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.96□□□□□ -0.02
SLC9A3P48764 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.96□□□□□ -0.02
SLC9A3P48764 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC9A3P48764 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.96□□□□□ -0.02
SLC9A3P48764 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC9A3P48764 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SLC9A3P48764 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
SLC9A3P48764 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC9A3P48764 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SLC9A3P48764 AC108073.2-201ENST00000464002 357 ntBASIC14.95□□□□□ -0.02
SLC9A3P48764 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.95□□□□□ -0.02
SLC9A3P48764 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC9A3P48764 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 MIR3909-201ENST00000579518 119 ntBASIC14.95□□□□□ -0.02
SLC9A3P48764 MIR4515-201ENST00000584082 81 ntBASIC14.95□□□□□ -0.02
SLC9A3P48764 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.95□□□□□ -0.02
SLC9A3P48764 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 AC021097.1-201ENST00000607902 574 ntBASIC14.95□□□□□ -0.02
SLC9A3P48764 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.95□□□□□ -0.02
SLC9A3P48764 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SLC9A3P48764 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
SLC9A3P48764 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SLC9A3P48764 AP002414.3-201ENST00000589352 1468 ntBASIC14.95□□□□□ -0.02
SLC9A3P48764 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SLC9A3P48764 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SLC9A3P48764 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 AC073347.1-201ENST00000421633 2643 ntBASIC14.94□□□□□ -0.02
SLC9A3P48764 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC9A3P48764 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SLC9A3P48764 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.94□□□□□ -0.02
SLC9A3P48764 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SLC9A3P48764 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.94□□□□□ -0.02
SLC9A3P48764 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SLC9A3P48764 PRSS29P-201ENST00000440800 595 ntBASIC14.94□□□□□ -0.02
SLC9A3P48764 FAM185BP-201ENST00000443595 716 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms