Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.37■□□□□ 0.37
SSR1P43307 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SSR1P43307 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SSR1P43307 AC023824.1-201ENST00000562945 2975 ntBASIC17.37■□□□□ 0.37
SSR1P43307 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR1P43307 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR1P43307 TPM4P1-201ENST00000436100 807 ntBASIC17.36■□□□□ 0.37
SSR1P43307 PRSS29P-201ENST00000440800 595 ntBASIC17.36■□□□□ 0.37
SSR1P43307 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.36■□□□□ 0.37
SSR1P43307 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.36■□□□□ 0.37
SSR1P43307 RNA5SP415-201ENST00000517246 115 ntBASIC17.36■□□□□ 0.37
SSR1P43307 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR1P43307 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.36■□□□□ 0.37
SSR1P43307 AC020765.3-201ENST00000613051 740 ntBASIC17.36■□□□□ 0.37
SSR1P43307 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SSR1P43307 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.36■□□□□ 0.37
SSR1P43307 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.36■□□□□ 0.37
SSR1P43307 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SSR1P43307 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SSR1P43307 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR1P43307 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR1P43307 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR1P43307 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.35■□□□□ 0.37
SSR1P43307 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.35■□□□□ 0.37
SSR1P43307 VN2R19P-201ENST00000442399 1052 ntBASIC17.35■□□□□ 0.37
SSR1P43307 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.35■□□□□ 0.37
SSR1P43307 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.35■□□□□ 0.37
SSR1P43307 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SSR1P43307 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SSR1P43307 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SSR1P43307 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.34■□□□□ 0.37
SSR1P43307 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.34■□□□□ 0.37
SSR1P43307 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.34■□□□□ 0.37
SSR1P43307 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SSR1P43307 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SSR1P43307 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms