Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 AC005332.1-201ENST00000577698 1310 ntBASIC11.02□□□□□ -0.65
CXCL5P42830 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CXCL5P42830 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.02□□□□□ -0.65
CXCL5P42830 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.02□□□□□ -0.65
CXCL5P42830 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
CXCL5P42830 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CXCL5P42830 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CXCL5P42830 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CXCL5P42830 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CXCL5P42830 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CXCL5P42830 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
CXCL5P42830 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CXCL5P42830 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CXCL5P42830 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.02□□□□□ -0.65
CXCL5P42830 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CXCL5P42830 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
CXCL5P42830 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 DKFZP434A062-201ENST00000573103 5021 ntBASIC11.01□□□□□ -0.65
CXCL5P42830 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 HLA-DQB2-231ENST00000435145 2026 ntBASIC11.01□□□□□ -0.65
CXCL5P42830 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.01□□□□□ -0.65
CXCL5P42830 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC11.01□□□□□ -0.65
CXCL5P42830 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.01□□□□□ -0.65
CXCL5P42830 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.01□□□□□ -0.65
CXCL5P42830 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.01□□□□□ -0.65
CXCL5P42830 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.01□□□□□ -0.65
CXCL5P42830 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.01□□□□□ -0.65
CXCL5P42830 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 AC005412.3-201ENST00000580309 715 ntBASIC11.01□□□□□ -0.65
CXCL5P42830 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.01□□□□□ -0.65
CXCL5P42830 AC010654.1-201ENST00000615722 808 ntBASIC11.01□□□□□ -0.65
CXCL5P42830 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.01□□□□□ -0.65
CXCL5P42830 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
CXCL5P42830 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.01□□□□□ -0.65
CXCL5P42830 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.01□□□□□ -0.65
CXCL5P42830 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.01□□□□□ -0.65
CXCL5P42830 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.01□□□□□ -0.65
CXCL5P42830 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
CXCL5P42830 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 LINC02447-202ENST00000501888 2146 ntBASIC11□□□□□ -0.65
CXCL5P42830 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
CXCL5P42830 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
CXCL5P42830 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11□□□□□ -0.65
CXCL5P42830 RBM17P3-201ENST00000417687 1192 ntBASIC11□□□□□ -0.65
CXCL5P42830 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
CXCL5P42830 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11□□□□□ -0.65
CXCL5P42830 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms