Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOBEC1P41238 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.68□□□□□ -0.06
APOBEC1P41238 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
APOBEC1P41238 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
APOBEC1P41238 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 MIR1233-2-201ENST00000408138 82 ntBASIC14.68□□□□□ -0.06
APOBEC1P41238 MIR1233-1-201ENST00000408722 82 ntBASIC14.68□□□□□ -0.06
APOBEC1P41238 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 AC004967.1-201ENST00000453589 447 ntBASIC14.68□□□□□ -0.06
APOBEC1P41238 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.68□□□□□ -0.06
APOBEC1P41238 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.68□□□□□ -0.06
APOBEC1P41238 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.68□□□□□ -0.06
APOBEC1P41238 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 SNHG9-202ENST00000564014 471 ntBASIC14.68□□□□□ -0.06
APOBEC1P41238 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.68□□□□□ -0.06
APOBEC1P41238 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.68□□□□□ -0.06
APOBEC1P41238 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 AC023511.2-201ENST00000618803 211 ntBASIC14.68□□□□□ -0.06
APOBEC1P41238 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 AC134684.3-201ENST00000641758 218 ntBASIC14.68□□□□□ -0.06
APOBEC1P41238 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
APOBEC1P41238 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
APOBEC1P41238 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 AP3S2-216ENST00000617003 1561 ntBASIC14.68□□□□□ -0.06
APOBEC1P41238 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
APOBEC1P41238 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.67□□□□□ -0.06
APOBEC1P41238 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.67□□□□□ -0.06
APOBEC1P41238 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.67□□□□□ -0.06
APOBEC1P41238 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 CNN2P11-201ENST00000429351 262 ntBASIC14.67□□□□□ -0.06
APOBEC1P41238 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.67□□□□□ -0.06
APOBEC1P41238 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.67□□□□□ -0.06
APOBEC1P41238 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.67□□□□□ -0.06
APOBEC1P41238 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.67□□□□□ -0.06
APOBEC1P41238 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.67□□□□□ -0.06
APOBEC1P41238 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
APOBEC1P41238 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.67□□□□□ -0.06
APOBEC1P41238 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
APOBEC1P41238 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms