Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT20P35900 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT20P35900 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT20P35900 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.52■□□□□ 0.07
KRT20P35900 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.52■□□□□ 0.07
KRT20P35900 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT20P35900 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
KRT20P35900 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.51■□□□□ 0.07
KRT20P35900 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT20P35900 IGLL3P-201ENST00000412472 434 ntBASIC15.51■□□□□ 0.07
KRT20P35900 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT20P35900 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
KRT20P35900 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT20P35900 AL031432.2-201ENST00000566714 459 ntBASIC15.51■□□□□ 0.07
KRT20P35900 AL928711.1-201ENST00000570165 459 ntBASIC15.51■□□□□ 0.07
KRT20P35900 CYP2A7P1-201ENST00000595391 815 ntBASIC15.51■□□□□ 0.07
KRT20P35900 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KRT20P35900 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KRT20P35900 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT20P35900 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT20P35900 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.51■□□□□ 0.07
KRT20P35900 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KRT20P35900 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT20P35900 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 BCAR1-209ENST00000546196 1340 ntBASIC15.5■□□□□ 0.07
KRT20P35900 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT20P35900 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT20P35900 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
KRT20P35900 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT20P35900 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT20P35900 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT20P35900 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
KRT20P35900 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
KRT20P35900 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
KRT20P35900 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
KRT20P35900 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT20P35900 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT20P35900 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT20P35900 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT20P35900 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT20P35900 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.49■□□□□ 0.07
KRT20P35900 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT20P35900 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
KRT20P35900 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
KRT20P35900 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT20P35900 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT20P35900 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT20P35900 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT20P35900 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms