Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.84■□□□□ 0.13
EPHA3P29320 DUSP5P1-201ENST00000441325 1139 ntBASIC15.84■□□□□ 0.13
EPHA3P29320 SCARNA2-201ENST00000458748 420 ntBASIC15.84■□□□□ 0.13
EPHA3P29320 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.84■□□□□ 0.13
EPHA3P29320 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.84■□□□□ 0.13
EPHA3P29320 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.84■□□□□ 0.13
EPHA3P29320 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.84■□□□□ 0.13
EPHA3P29320 AC021087.4-201ENST00000563761 564 ntBASIC15.84■□□□□ 0.13
EPHA3P29320 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
EPHA3P29320 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.84■□□□□ 0.13
EPHA3P29320 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
EPHA3P29320 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA3P29320 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA3P29320 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA3P29320 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
EPHA3P29320 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.83■□□□□ 0.13
EPHA3P29320 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.83■□□□□ 0.13
EPHA3P29320 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.13
EPHA3P29320 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
EPHA3P29320 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EPHA3P29320 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA3P29320 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA3P29320 KRT18P31-201ENST00000506277 1292 ntBASIC15.83■□□□□ 0.12
EPHA3P29320 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC15.83■□□□□ 0.12
EPHA3P29320 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA3P29320 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.83■□□□□ 0.12
EPHA3P29320 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHA3P29320 AC107918.4-202ENST00000641623 219 ntBASIC15.83■□□□□ 0.12
EPHA3P29320 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.83■□□□□ 0.12
EPHA3P29320 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
EPHA3P29320 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
EPHA3P29320 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 AL109954.1-202ENST00000564051 2148 ntBASIC15.83■□□□□ 0.12
EPHA3P29320 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
EPHA3P29320 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
EPHA3P29320 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EPHA3P29320 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.82■□□□□ 0.12
EPHA3P29320 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHA3P29320 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.82■□□□□ 0.12
EPHA3P29320 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHA3P29320 KRT18P27-201ENST00000427733 1299 ntBASIC15.82■□□□□ 0.12
EPHA3P29320 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
EPHA3P29320 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.82■□□□□ 0.12
EPHA3P29320 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.82■□□□□ 0.12
EPHA3P29320 AC091076.1-201ENST00000610741 619 ntBASIC15.82■□□□□ 0.12
EPHA3P29320 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
EPHA3P29320 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms