Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
FREM3P0C091 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.72□□□□□ -0.05
FREM3P0C091 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
FREM3P0C091 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
FREM3P0C091 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.71□□□□□ -0.05
FREM3P0C091 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.71□□□□□ -0.05
FREM3P0C091 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.71□□□□□ -0.05
FREM3P0C091 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.71□□□□□ -0.05
FREM3P0C091 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
FREM3P0C091 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.71□□□□□ -0.05
FREM3P0C091 AC236430.1-201ENST00000402231 743 ntBASIC14.71□□□□□ -0.05
FREM3P0C091 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.71□□□□□ -0.05
FREM3P0C091 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.71□□□□□ -0.05
FREM3P0C091 AC098859.1-201ENST00000502915 1238 ntBASIC14.71□□□□□ -0.05
FREM3P0C091 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.71□□□□□ -0.05
FREM3P0C091 AC010336.2-201ENST00000564226 506 ntBASIC14.71□□□□□ -0.05
FREM3P0C091 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.71□□□□□ -0.05
FREM3P0C091 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.71□□□□□ -0.05
FREM3P0C091 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
FREM3P0C091 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
FREM3P0C091 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.71□□□□□ -0.05
FREM3P0C091 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.71□□□□□ -0.05
FREM3P0C091 REXO1L8P-201ENST00000604378 1897 ntBASIC14.71□□□□□ -0.05
FREM3P0C091 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
FREM3P0C091 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.71□□□□□ -0.06
FREM3P0C091 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
FREM3P0C091 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
FREM3P0C091 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
FREM3P0C091 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.06
FREM3P0C091 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.71□□□□□ -0.06
FREM3P0C091 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.71□□□□□ -0.06
FREM3P0C091 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.71□□□□□ -0.06
FREM3P0C091 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.71□□□□□ -0.06
FREM3P0C091 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.71□□□□□ -0.06
FREM3P0C091 AL136982.4-201ENST00000437689 1740 ntBASIC14.71□□□□□ -0.06
FREM3P0C091 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.71□□□□□ -0.06
FREM3P0C091 AC024909.3-201ENST00000611513 2257 ntBASIC14.7□□□□□ -0.06
FREM3P0C091 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
FREM3P0C091 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
FREM3P0C091 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
FREM3P0C091 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
FREM3P0C091 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.7□□□□□ -0.06
FREM3P0C091 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.7□□□□□ -0.06
FREM3P0C091 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
FREM3P0C091 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
FREM3P0C091 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.7□□□□□ -0.06
FREM3P0C091 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.7□□□□□ -0.06
FREM3P0C091 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 MIR4321-201ENST00000592276 80 ntBASIC14.7□□□□□ -0.06
FREM3P0C091 LINC02560-201ENST00000596379 459 ntBASIC14.7□□□□□ -0.06
FREM3P0C091 AC092364.2-202ENST00000597012 1073 ntBASIC14.7□□□□□ -0.06
FREM3P0C091 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.7□□□□□ -0.06
FREM3P0C091 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.7□□□□□ -0.06
FREM3P0C091 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
FREM3P0C091 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.7□□□□□ -0.06
FREM3P0C091 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
FREM3P0C091 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
FREM3P0C091 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
FREM3P0C091 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.69□□□□□ -0.06
FREM3P0C091 COX20P2-201ENST00000452636 358 ntBASIC14.69□□□□□ -0.06
FREM3P0C091 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms