Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 TMED1-207ENST00000591695 809 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.05□□□□□ -0.32
APOC3P02656 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
APOC3P02656 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
APOC3P02656 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC3P02656 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
APOC3P02656 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.05□□□□□ -0.32
APOC3P02656 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.04□□□□□ -0.32
APOC3P02656 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.04□□□□□ -0.32
APOC3P02656 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 AC112693.3-201ENST00000624819 1983 ntBASIC13.04□□□□□ -0.32
APOC3P02656 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 MYCLP1-201ENST00000372451 1075 ntBASIC13.04□□□□□ -0.32
APOC3P02656 MIR648-201ENST00000385046 94 ntBASIC13.04□□□□□ -0.32
APOC3P02656 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 AC004951.3-201ENST00000418645 1148 ntBASIC13.04□□□□□ -0.32
APOC3P02656 APTR-203ENST00000430801 583 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 DUX4L16-201ENST00000555130 1264 ntBASIC13.04□□□□□ -0.32
APOC3P02656 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.04□□□□□ -0.32
APOC3P02656 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.04□□□□□ -0.32
APOC3P02656 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.04□□□□□ -0.32
APOC3P02656 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
APOC3P02656 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.03□□□□□ -0.32
APOC3P02656 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.03□□□□□ -0.32
APOC3P02656 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 ID1-201ENST00000376105 1233 ntBASIC13.03□□□□□ -0.32
APOC3P02656 KRT18P65-201ENST00000439811 1286 ntBASIC13.03□□□□□ -0.32
APOC3P02656 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
APOC3P02656 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
APOC3P02656 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
APOC3P02656 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms