Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.11□□□□□ -0.31
TCRBV4S1A1TA0A5B7 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 IGHV3-62-201ENST00000520057 340 ntBASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RARRES2P8-201ENST00000566335 367 ntBASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PAUPAR-201ENST00000630360 2965 ntBASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TCRBV4S1A1TA0A5B7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
TCRBV4S1A1TA0A5B7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms