Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
TRAPPC1Q9Y5R8 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 MIR663A-201ENST00000385250 93 ntBASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 MESTP1-201ENST00000404287 994 ntBASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 AC110285.5-201ENST00000611501 352 ntBASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 AC010460.3-201ENST00000511359 1579 ntBASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAPPC1Q9Y5R8 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
TRAPPC1Q9Y5R8 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TRAPPC1Q9Y5R8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
TRAPPC1Q9Y5R8 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.43
TRAPPC1Q9Y5R8 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC12.33□□□□□ -0.43
TRAPPC1Q9Y5R8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC12.33□□□□□ -0.43
TRAPPC1Q9Y5R8 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 AL031595.1-201ENST00000623969 4709 ntBASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAPPC1Q9Y5R8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms